Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC016831.2-201ENST00000417179 352 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 snoU109.2-201ENST00000459316 135 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC026801.1-201ENST00000497178 464 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 TRBVA-201ENST00000498804 316 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC010265.1-201ENST00000513509 211 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC069113.1-201ENST00000517763 267 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC005261.5-201ENST00000596280 355 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AL670379.10-201ENST00000604330 253 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AL670379.9-201ENST00000605428 253 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC087045.1-201ENST00000605856 382 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 RNU6-85P-201ENST00000605989 107 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC025253.1-201ENST00000613623 543 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC063943.3-201ENST00000615562 356 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC006386.2-201ENST00000624491 75 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC012005.1-201ENST00000624575 75 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 Z69720.2-201ENST00000624755 279 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TBC1D3FA6NER0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TBC1D3FA6NER0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
TBC1D3FA6NER0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TBC1D3FA6NER0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.15□□□□□ -1.9
TBC1D3FA6NER0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TBC1D3FA6NER0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 SNORA14A-201ENST00000364773 135 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 RNU6-898P-201ENST00000365627 104 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 SNORA7.4-201ENST00000384249 137 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 MIR34A-201ENST00000385130 110 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 MIR591-201ENST00000385290 95 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AL122016.1-201ENST00000403365 367 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC023141.4-201ENST00000412031 328 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 BX679664.1-201ENST00000434429 253 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 MRPL50P4-201ENST00000446432 475 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 PPP1R2P5-201ENST00000457256 603 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 RNU7-23P-201ENST00000459465 62 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 RNU7-138P-201ENST00000459479 64 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC103851.1-201ENST00000506833 274 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 RNU6-711P-201ENST00000517255 106 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC009812.2-201ENST00000517657 457 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC087854.1-201ENST00000519706 414 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 NACAP3-201ENST00000552100 481 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AL138726.1-201ENST00000614873 333 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC110491.1-201ENST00000562191 2010 ntBASIC3.15□□□□□ -1.91
TBC1D3FA6NER0 AC233263.6-201ENST00000631132 1963 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-37P-201ENST00000362692 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-11P-201ENST00000364234 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-7-201ENST00000364784 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-8-201ENST00000365467 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AP002088.1-201ENST00000382740 395 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-25P-201ENST00000383873 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-1-201ENST00000383898 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-48P-201ENST00000384161 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-36P-201ENST00000384172 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-4P-201ENST00000384205 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-5P-201ENST00000384238 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-3P-201ENST00000384314 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-16P-201ENST00000384385 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-15P-201ENST00000384534 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-2-201ENST00000384627 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-29P-201ENST00000384637 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-9-201ENST00000384776 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-33P-201ENST00000384793 107 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RPL32P28-201ENST00000443577 397 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 HMGN2P10-201ENST00000448085 265 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AC128713.1-201ENST00000471495 306 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-1332P-201ENST00000516666 104 ntBASIC3.14□□□□□ -1.91
TBC1D3FA6NER0 RNU6-273P-201ENST00000516937 96 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms