Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AL136097.1-201ENST00000456945 913 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 MED28P2-201ENST00000475771 317 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 RPL7P42-201ENST00000481005 679 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 PTP4A1P4-201ENST00000512479 322 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC026782.1-201ENST00000512952 449 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 ACA59.1-201ENST00000515966 143 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC109446.1-201ENST00000566172 220 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC009163.5-201ENST00000575421 637 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC133104.2-201ENST00000615272 193 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 AC010889.1-201ENST00000566193 2666 ntBASIC3.22□□□□□ -1.89
MBD3L4A6NDZ8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
MBD3L4A6NDZ8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.89
MBD3L4A6NDZ8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 RNA5SP354-201ENST00000391247 136 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 NDUFB4P4-201ENST00000404822 243 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 MTND3P9-201ENST00000429526 346 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AL133396.1-201ENST00000432048 687 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 SNORD5.1-201ENST00000458800 75 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC008571.1-201ENST00000467232 300 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC107626.1-201ENST00000471084 183 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC114801.2-201ENST00000503825 781 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-612P-201ENST00000516909 102 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 SNORD19.2-201ENST00000516978 73 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC011471.1-201ENST00000585766 187 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC018889.1-201ENST00000605372 397 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AC080078.3-201ENST00000605407 463 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 AL157817.1-201ENST00000614264 790 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MBD3L4A6NDZ8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.2-201ENST00000362330 96 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-750P-201ENST00000390946 107 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 RPS29P13-201ENST00000402041 169 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 FTH1P25-201ENST00000447665 469 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC133134.1-201ENST00000466800 359 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 RPL7P47-201ENST00000497299 556 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 SMURF2P1-201ENST00000514992 481 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 SNORA31.18-201ENST00000517043 134 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AP005902.1-201ENST00000521358 186 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 CR383656.8-201ENST00000549046 145 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC005046.1-201ENST00000608515 625 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 AC098657.3-201ENST00000620434 263 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 MFSD8-236ENST00000641509 4050 ntBASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MBD3L4A6NDZ8 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3L4A6NDZ8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms