Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 UBE2V1P4-201ENST00000425374 344 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RPL26P9-201ENST00000457466 433 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AC117440.1-201ENST00000474107 571 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.682-201ENST00000516457 100 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-1332P-201ENST00000516666 104 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 NUTF2P8-201ENST00000604593 363 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AC123912.5-201ENST00000605470 343 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AL359314.1-201ENST00000616913 261 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 MIR6134-201ENST00000617606 109 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 MIR22-201ENST00000362190 85 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-562P-201ENST00000362731 107 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-1329P-201ENST00000365664 107 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-72P-201ENST00000384285 79 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RNVU1-14-201ENST00000384770 164 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AL139396.1-201ENST00000421137 167 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 PGBD4P6-201ENST00000421501 610 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AL645568.3-201ENST00000433683 316 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 HMGN2P20-201ENST00000437531 273 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC092001.1-201ENST00000453012 261 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RNU7-23P-201ENST00000459465 62 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RN7SL330P-201ENST00000469709 307 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RPS29P20-201ENST00000489592 171 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 RN7SL504P-201ENST00000494496 287 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 MTND5P5-201ENST00000503764 376 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC092436.3-201ENST00000511788 257 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 SNORA70.14-201ENST00000516205 110 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AP005639.2-201ENST00000527592 928 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AP000867.2-201ENST00000532468 320 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC025423.5-201ENST00000550230 219 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC026371.1-201ENST00000551867 419 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC007151.1-201ENST00000572774 483 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 OR1M4P-201ENST00000589199 287 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC034229.5-201ENST00000624258 185 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AC110491.1-201ENST00000562191 2010 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AL035425.3-201ENST00000564206 4996 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 AP003122.5-201ENST00000527668 3766 ntBASIC3.03□□□□□ -1.92
TCRBV7S3A2A0A539 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC233263.6-201ENST00000631132 1963 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 CDC27P3-201ENST00000635418 1910 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 RNU6-198P-201ENST00000384258 104 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 EI24P2-201ENST00000397776 1076 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 U3.37-201ENST00000408528 213 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 RN7SKP158-201ENST00000410453 326 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 SNORD56-201ENST00000413522 71 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC074085.1-201ENST00000413598 418 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 TOMM20P4-201ENST00000427861 435 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 HMGN2P10-201ENST00000448085 265 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC104472.2-201ENST00000469035 601 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC128713.1-201ENST00000471495 306 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 MIR4790-201ENST00000577799 79 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC138761.3-201ENST00000579993 334 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 POLR3GP2-201ENST00000588366 668 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC113139.1-201ENST00000605049 239 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 MTND4LP5-201ENST00000605152 292 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 PLCE1P1-201ENST00000622094 305 ntBASIC3.02□□□□□ -1.93
TCRBV7S3A2A0A539 SCARNA4-202ENST00000625402 129 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms