Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-898P-201ENST00000365627 104 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 U8.13-201ENST00000390842 128 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL096701.2-201ENST00000416920 238 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL160275.3-201ENST00000423876 471 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC007560.1-201ENST00000426912 237 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 MTCO2P16-201ENST00000436962 677 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL161651.1-201ENST00000440882 223 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 KATNBL1P3-201ENST00000443475 909 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 MTCO1P19-201ENST00000443487 500 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL136380.1-201ENST00000447970 162 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL583843.1-201ENST00000456070 346 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 EIF4EP3-201ENST00000498782 656 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC117522.1-201ENST00000509821 380 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 RNU5F-8P-201ENST00000515941 111 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-143P-201ENST00000516942 93 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC087883.1-201ENST00000551882 391 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 MIR3682-201ENST00000581338 84 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC008521.1-201ENST00000587471 187 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC119751.7-201ENST00000600494 245 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC008121.1-201ENST00000603244 268 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 MIR6134-201ENST00000617606 109 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL359740.1-201ENST00000624340 592 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 MIR3199-2-201ENST00000636243 86 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 AC093536.2-201ENST00000565257 1406 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 HSPA8P4-201ENST00000511877 1920 ntBASIC2.15□□□□□ -2.07
SMIM28A0A1B0GU29 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 Y_RNA.33-201ENST00000362591 102 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-74P-201ENST00000384235 107 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 MIR578-201ENST00000384828 96 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 MIR1-2-201ENST00000384961 85 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 MIR301A-201ENST00000385261 86 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AL358934.1-201ENST00000432346 324 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AL078601.1-201ENST00000444542 271 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC010424.1-201ENST00000506336 297 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 ARL2BPP4-201ENST00000506854 471 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC112206.3-201ENST00000514578 389 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC117532.1-201ENST00000514638 323 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-430P-201ENST00000517078 107 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 RNU1-104P-201ENST00000517280 175 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AP003072.2-201ENST00000527756 676 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 NACAP3-201ENST00000552100 481 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC025678.1-201ENST00000567861 338 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 MIR1273C-201ENST00000578669 77 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC010620.1-201ENST00000601088 1102 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AL356280.1-201ENST00000603614 379 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC006566.1-201ENST00000608943 513 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC010678.1-201ENST00000614118 713 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC099842.1-201ENST00000619919 596 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC024940.5-201ENST00000622889 474 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 FO624990.1-201ENST00000636373 85 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 AC004520.1-201ENST00000608362 1413 ntBASIC2.14□□□□□ -2.07
SMIM28A0A1B0GU29 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 Y_RNA.77-201ENST00000362962 107 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 RNA5SP393-201ENST00000363423 117 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 RNY1P12-201ENST00000364251 105 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 Y_RNA.553-201ENST00000384670 102 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC000111.3-201ENST00000433478 193 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 GPR143P-201ENST00000434155 205 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC004383.1-201ENST00000438135 289 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AL360221.1-201ENST00000445989 335 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 MTND1P27-201ENST00000451117 902 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 TPT1P7-201ENST00000458300 517 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-956P-201ENST00000458868 103 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC116562.3-201ENST00000506136 177 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC116337.1-201ENST00000509680 687 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD27.1-201ENST00000516319 72 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-410P-201ENST00000517006 107 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 SCARNA11.3-201ENST00000517276 130 ntBASIC2.13□□□□□ -2.07
SMIM28A0A1B0GU29 BTF3P12-201ENST00000519620 469 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms