Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.71□□□□□ -2.3
TRBV27A0A0K0K1C4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.71□□□□□ -2.3
TRBV27A0A0K0K1C4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.71□□□□□ -2.3
TRBV27A0A0K0K1C4 AC012676.2-201ENST00000619258 186 ntBASIC0.71□□□□□ -2.3
TRBV27A0A0K0K1C4 AL157770.1-201ENST00000623049 439 ntBASIC0.71□□□□□ -2.3
TRBV27A0A0K0K1C4 AC099654.9-201ENST00000637055 678 ntBASIC0.71□□□□□ -2.3
TRBV27A0A0K0K1C4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU1-22P-201ENST00000363334 158 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-792P-201ENST00000363490 107 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-944P-201ENST00000364023 107 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNA5SP493-201ENST00000364115 91 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNA5SP126-201ENST00000365092 109 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-160P-201ENST00000384591 107 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-1222P-201ENST00000384615 107 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 SNORD65.1-201ENST00000390889 71 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AC069282.1-201ENST00000411911 526 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 MTND2P20-201ENST00000440805 661 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 RPL26P26-201ENST00000480251 434 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AC108078.1-201ENST00000508073 725 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AC010468.3-201ENST00000508225 458 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 MTCYBP40-201ENST00000509390 1135 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AC093259.1-201ENST00000509755 300 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AC018630.3-201ENST00000542637 96 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 TRAV32-201ENST00000553993 340 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 CYP3A52P-201ENST00000563326 91 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 MIR3169-201ENST00000578032 83 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AC130454.1-201ENST00000622948 401 ntBASIC0.7□□□□□ -2.3
TRBV27A0A0K0K1C4 AL391516.1-201ENST00000554380 2449 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 CDR1-202ENST00000625883 1485 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-112P-201ENST00000363599 104 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-457P-201ENST00000363999 107 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU4-38P-201ENST00000364472 129 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 FTH1P15-201ENST00000406984 280 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RPL21P90-201ENST00000415692 466 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 UBE2V1P8-201ENST00000437166 265 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 PGBD4P5-201ENST00000445958 426 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AL513124.1-201ENST00000450410 614 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RPL39P28-201ENST00000465655 155 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC114982.1-201ENST00000469402 321 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-572P-201ENST00000516724 80 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RN7SKP256-201ENST00000517201 314 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 SLC2A13P1-201ENST00000531560 322 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 ZNF92P2-201ENST00000600543 1059 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC112220.3-201ENST00000605502 502 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC093648.1-201ENST00000623546 606 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 AC099654.5-201ENST00000636479 350 ntBASIC0.69□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-655P-201ENST00000362858 107 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-529P-201ENST00000363383 104 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 SNORA29-201ENST00000384183 140 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 MRPL35P1-201ENST00000404272 572 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RPS12P24-201ENST00000412619 387 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 BTF3P4-201ENST00000418852 495 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 SNRPEP10-201ENST00000420249 274 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AL589872.1-201ENST00000426602 288 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 DEFB130D-201ENST00000426866 237 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RPS6P15-201ENST00000431996 751 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 TRIM60P13-201ENST00000432350 1283 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 PRPS1P1-201ENST00000445305 876 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 HMGN2P18-201ENST00000450680 270 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RPS23P4-201ENST00000487908 423 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RPS3AP22-201ENST00000488297 769 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-991P-201ENST00000516168 107 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AC100821.1-201ENST00000523153 2479 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AP006587.4-201ENST00000526053 529 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AC023538.1-201ENST00000534576 736 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 HIGD1AP17-201ENST00000554576 276 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 RPS3AP4-201ENST00000555161 764 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AC122134.1-202ENST00000569111 1201 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AC005786.1-201ENST00000588553 154 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 VN1R83P-201ENST00000595685 445 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AL158827.2-201ENST00000602494 330 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AC013412.1-201ENST00000610687 192 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 AL691447.3-201ENST00000635020 330 ntBASIC0.68□□□□□ -2.3
TRBV27A0A0K0K1C4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU6-858P-201ENST00000362436 107 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 RNU1-17P-201ENST00000363022 152 ntBASIC0.67□□□□□ -2.3
TRBV27A0A0K0K1C4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms