Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 FDX1P2-201ENST00000450769 375 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 RPL23AP35-201ENST00000451906 501 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 HMGN1P7-201ENST00000491722 313 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 PSMC1P5-201ENST00000512850 177 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC019176.1-201ENST00000518519 225 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 CYCSP23-201ENST00000519781 313 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC136619.2-201ENST00000563361 631 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC093249.1-201ENST00000567049 203 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC133485.1-201ENST00000567176 124 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC138907.6-201ENST00000568401 126 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR3169-201ENST00000578032 83 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC008088.1-201ENST00000580993 280 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC016727.1-205ENST00000605437 569 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC107952.2-201ENST00000606048 486 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AC008993.2-201ENST00000631744 806 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 MTND4P16-201ENST00000466108 1367 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-839P-201ENST00000363347 108 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 Y_RNA.140-201ENST00000363474 103 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-637P-201ENST00000384050 107 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 TMSB4XP8-201ENST00000402089 135 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 MTCO2P31-201ENST00000402702 684 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AL133264.1-201ENST00000407157 562 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 TMSB4XP6-201ENST00000415187 135 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 TMSB4XP1-201ENST00000424567 135 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 SNRPEP7-201ENST00000438350 220 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 USP9YP22-201ENST00000438971 294 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 OR6C5P-201ENST00000452388 923 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 FABP5P15-201ENST00000453566 214 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC026410.2-201ENST00000460281 156 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC118282.2-201ENST00000508739 374 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 MTCYBP43-201ENST00000513621 740 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1183P-201ENST00000517054 60 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC136628.3-201ENST00000521868 290 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 TRAV32-201ENST00000553993 340 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC015688.6-201ENST00000577737 104 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 MIR3937-201ENST00000580135 106 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 MTCO2P2-201ENST00000591258 225 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 MZT1P2-201ENST00000604387 248 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AL161798.1-201ENST00000604630 131 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC112220.3-201ENST00000605502 502 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AL022345.2-201ENST00000606307 135 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC004908.3-201ENST00000610248 625 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC090970.3-201ENST00000612566 866 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 AC022513.1-201ENST00000624512 117 ntBASIC0.4□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1167P-201ENST00000363227 94 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RNA5SP99-201ENST00000364020 114 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RNA5SP493-201ENST00000364115 91 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1274P-201ENST00000384557 107 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-360P-201ENST00000390944 104 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-796P-201ENST00000391086 107 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RPL23AP32-201ENST00000395315 459 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 MRPL35P1-201ENST00000404272 572 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU2-64P-201ENST00000411315 191 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 MTCO3P1-205ENST00000422088 832 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 ISCA1P1-201ENST00000426679 387 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 TPTE2P1-204ENST00000435256 593 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 MTND2P4-201ENST00000445034 1004 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC108059.3-201ENST00000456388 214 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC034244.1-201ENST00000507687 207 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC091057.3-201ENST00000602684 733 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 snoU13.31-201ENST00000607291 104 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC013470.4-201ENST00000619978 986 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AL589994.2-201ENST00000621124 579 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC106730.3-201ENST00000624568 641 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 FARSBP1-201ENST00000435808 1778 ntBASIC0.39□□□□□ -2.35
TRAV1-2A0A0B4J238 AC138393.1-203ENST00000327086 343 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-23P-201ENST00000363283 107 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1280P-201ENST00000365211 107 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 MIR19B1-201ENST00000384829 87 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-754P-201ENST00000391166 107 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AL117342.1-201ENST00000404861 406 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC114482.1-201ENST00000418010 247 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 BTF3L4P3-201ENST00000418879 476 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC002542.1-201ENST00000440683 193 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 HMGN1P13-201ENST00000505795 138 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 MTCYBP40-201ENST00000509390 1135 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC093259.1-201ENST00000509755 300 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-197P-201ENST00000516680 100 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms