Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SNORA17.3-201ENST00000391159 129 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC063976.4-201ENST00000421971 163 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC004941.2-201ENST00000427009 228 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 FABP5P15-201ENST00000453566 214 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 SNORD13-201ENST00000459299 104 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC023194.1-201ENST00000493084 308 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 SAP18P1-201ENST00000512058 390 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 MTND5P13-201ENST00000513046 1079 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC087897.1-201ENST00000550134 156 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC025423.5-201ENST00000550230 219 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC091489.2-201ENST00000566263 604 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 LARP7P3-201ENST00000579888 337 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 MIR4648-201ENST00000580107 72 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC009977.1-201ENST00000586015 570 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AL353997.4-201ENST00000586196 166 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC011494.1-201ENST00000596454 237 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AL390838.2-201ENST00000602394 274 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 SRGNP1-201ENST00000603392 451 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AL161798.1-201ENST00000604630 131 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC009237.15-201ENST00000610252 501 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC013412.1-201ENST00000610687 192 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC108706.1-201ENST00000611053 297 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 AC106858.1-201ENST00000637497 429 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 RNU6-40P-201ENST00000384254 107 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 MIR520A-201ENST00000384862 85 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 MIR200A-201ENST00000384875 90 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 DHFRP6-201ENST00000401776 268 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL031577.2-201ENST00000404133 280 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL356776.1-201ENST00000406574 447 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 RNU2-7P-201ENST00000410794 178 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 TAF13P2-201ENST00000416876 286 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AC138623.1-201ENST00000418060 216 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL358794.1-201ENST00000445689 381 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 RNU5A-4P-201ENST00000516588 111 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 RNU6-295P-201ENST00000516901 104 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 RN7SKP256-201ENST00000517201 314 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL356057.1-201ENST00000533798 831 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AC120349.3-201ENST00000624377 529 ntBASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LINC01558Q9Y6Z2 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 SNORA7.1-201ENST00000363750 139 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 SNORD114-6-201ENST00000364393 72 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 RNU6-1078P-201ENST00000364522 103 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 RNU4-12P-201ENST00000365233 139 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 RNU6-945P-201ENST00000383947 107 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AL021407.1-201ENST00000404531 386 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AL356967.1-201ENST00000406305 431 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 SNORA3.2-201ENST00000408221 125 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 MTCO3P1-205ENST00000422088 832 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 USP9YP22-201ENST00000438971 294 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 MTCO2P25-201ENST00000447065 681 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 RPL30P6-201ENST00000475925 342 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC002350.1-201ENST00000490759 375 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 FAM92A1P2-202ENST00000504766 877 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 RNA5SP437-201ENST00000517249 129 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC018659.1-201ENST00000551083 169 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC090615.1-201ENST00000577519 154 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC107304.1-201ENST00000604229 296 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC090578.1-201ENST00000604955 591 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AP001596.2-201ENST00000608410 312 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC093788.1-201ENST00000609356 927 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 MIR378J-201ENST00000611988 109 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC006133.1-201ENST00000617106 264 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AC013470.4-201ENST00000619978 986 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.19□□□□□ -2.38
LINC01558Q9Y6Z2 AL589994.2-201ENST00000621124 579 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 287.6 ms