Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ISCA1P1-201ENST00000426679 387 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 BRK1P2-201ENST00000442875 223 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 AC079776.3-201ENST00000450665 370 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 SNORA48.11-201ENST00000517015 89 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 MIR3912-201ENST00000577566 105 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 AC011712.1-201ENST00000588959 234 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 AC091152.3-201ENST00000604227 325 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 AC016925.2-201ENST00000605108 242 ntBASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN10AQ9Y5Y9 RNU6-1280P-201ENST00000365211 107 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 RNU6-1207P-201ENST00000384343 107 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AC093852.1-201ENST00000503587 266 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AC022784.5-201ENST00000522241 437 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 MTCO3P15-201ENST00000526563 574 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 VN1R107P-201ENST00000601784 209 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AL359314.1-201ENST00000616913 261 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 UBE2V1P15-201ENST00000407776 448 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 MTCO3P46-201ENST00000425787 232 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AP000949.1-201ENST00000438328 629 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AL354941.1-201ENST00000438600 464 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 SNRPFP3-201ENST00000457792 225 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 RNU7-136P-201ENST00000458819 69 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 SNORA25.11-201ENST00000515935 105 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 UBE2L4-201ENST00000587688 464 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 AL391646.1-201ENST00000603860 190 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 MIR8084-201ENST00000614105 89 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 Z99571.1-201ENST00000636677 394 ntBASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.17□□□□□ -2.22
SCN10AQ9Y5Y9 RNU1-133P-201ENST00000364867 167 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 RNU1-39P-201ENST00000383897 165 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 USP9YP22-201ENST00000438971 294 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC004987.4-201ENST00000603383 338 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC069545.1-201ENST00000605671 358 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC138627.2-201ENST00000624202 601 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC097655.1-201ENST00000635075 318 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 U6.112-201ENST00000384129 70 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AL139421.1-201ENST00000423010 169 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC244035.1-201ENST00000430042 390 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 TPRKBP1-201ENST00000456243 481 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC136619.2-201ENST00000563361 631 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 MIR4782-201ENST00000577987 79 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AL355598.1-201ENST00000604169 202 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AL109620.1-201ENST00000618738 1197 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC097460.3-201ENST00000623099 442 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC231657.1-201ENST00000624313 397 ntBASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
SCN10AQ9Y5Y9 SNORA62.1-201ENST00000364287 154 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 RNU6-1122P-201ENST00000384449 107 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 RNU6-952P-201ENST00000391164 108 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 RPL7P27-201ENST00000403775 720 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 RPS20P15-201ENST00000412792 311 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 MTCO2P20-201ENST00000437339 673 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 TRAV32-201ENST00000553993 340 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 CYP2C61P-201ENST00000604072 290 ntBASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN10AQ9Y5Y9 ZNF680P1-201ENST00000436625 1469 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 RNU1-62P-201ENST00000362599 164 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 RNU6-1167P-201ENST00000363227 94 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AC108059.3-201ENST00000456388 214 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AC112492.4-201ENST00000456549 352 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 FCF1P6-201ENST00000456841 595 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AC027338.1-201ENST00000514840 825 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 RNU6-1102P-201ENST00000516149 96 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 ZNF971P-201ENST00000562068 1249 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AC023825.1-201ENST00000566704 1030 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 AL079343.1-201ENST00000572358 1771 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
SCN10AQ9Y5Y9 DHFRP6-201ENST00000401776 268 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms