Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 AC126124.2-201ENST00000413542 321 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 AC012308.1-201ENST00000451232 178 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 AC090515.1-201ENST00000465295 476 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 RPS29P2-201ENST00000479278 136 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP228-201ENST00000516232 133 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP281-201ENST00000516504 135 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 SNORA31.20-201ENST00000517111 133 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC00901.1-201ENST00000617252 152 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 SMG1P4-204ENST00000523028 4131 ntBASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA4Q9Y5G9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP319-201ENST00000362768 119 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP131-201ENST00000365452 119 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-178P-201ENST00000384631 104 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP496-201ENST00000391240 109 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AL133270.1-201ENST00000402635 279 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RNA5SP390-201ENST00000410191 113 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AL365496.1-201ENST00000426885 215 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RPL12P3-201ENST00000440080 396 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 Z75741.1-201ENST00000446793 314 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RPL37P4-201ENST00000448908 268 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 NDUFS5P3-201ENST00000450668 321 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU4-60P-201ENST00000517239 135 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 IGLV3-24-201ENST00000517477 197 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AC137627.1-201ENST00000545761 289 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 HMGN2P6-201ENST00000551091 273 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AC025281.1-201ENST00000567026 265 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AL591034.3-201ENST00000605511 685 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 AL022345.2-201ENST00000606307 135 ntBASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA4Q9Y5G9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AL513302.2-201ENST00000562313 1842 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 RN7SKP185-201ENST00000362813 326 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6-778P-201ENST00000363269 103 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR1263-201ENST00000408324 86 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 RN7SKP125-201ENST00000410481 302 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AL135786.1-201ENST00000415892 214 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 RNF10P1-201ENST00000418589 369 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AC005300.1-201ENST00000428401 373 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AC000111.2-201ENST00000448200 210 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AC009163.5-201ENST00000575421 637 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR4311-201ENST00000580794 100 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 MIR3136-201ENST00000583498 78 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AC099778.2-201ENST00000610904 211 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 Mico1.1-201ENST00000611698 204 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 AC134878.1-201ENST00000619901 243 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.4□□□□□ -1.54
PCDHGA4Q9Y5G9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PCDHGA4Q9Y5G9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.4□□□□□ -1.55
PCDHGA4Q9Y5G9 AP001273.1-201ENST00000624493 3152 ntBASIC5.4□□□□□ -1.55
PCDHGA4Q9Y5G9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 AL360270.2-201ENST00000562952 5985 ntBASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 RNA5SP326-201ENST00000363209 110 ntBASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 AP002088.1-201ENST00000382740 395 ntBASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 RNU1-73P-201ENST00000383971 164 ntBASIC5.39□□□□□ -1.55
PCDHGA4Q9Y5G9 RNU6-484P-201ENST00000384016 107 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms