Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AL356057.2-201ENST00000403318 432 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 RAP1BP3-201ENST00000407180 549 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 NCOR1P3-201ENST00000420479 303 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 SKA2P1-201ENST00000425592 390 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 RPL26P9-201ENST00000457466 433 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 snoU13.28-201ENST00000459235 104 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 MTND4LP22-201ENST00000508209 276 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 AC010265.1-201ENST00000513509 211 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 RNU6-273P-201ENST00000516937 96 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 AC087854.1-201ENST00000519706 414 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 AC093331.1-201ENST00000521474 169 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKP3Q9Y446 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 NUTF2P8-201ENST00000604593 363 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 TPTEP1-208ENST00000636884 213 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP3Q9Y446 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP3Q9Y446 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKP3Q9Y446 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKP3Q9Y446 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 NDUFS5P4-201ENST00000412983 318 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 VN1R36P-201ENST00000414936 291 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 RNU7-138P-201ENST00000459479 64 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 AC034236.1-201ENST00000469891 373 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 RPL7P43-201ENST00000478876 753 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 MTND3P22-201ENST00000510932 243 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 RNU6-1183P-201ENST00000517054 60 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.12□□□□□ -1.91
PKP3Q9Y446 MIR5004-201ENST00000579078 107 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 FAM157A-202ENST00000615155 405 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 RMST_7.1-201ENST00000621935 268 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
PKP3Q9Y446 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKP3Q9Y446 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 RNU6-797P-201ENST00000363101 109 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 Y_RNA.184-201ENST00000363884 108 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 Y_RNA.356-201ENST00000365475 113 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AL122016.1-201ENST00000403365 367 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 RPL5P18-201ENST00000406671 891 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 PGBD4P6-201ENST00000421501 610 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 HMGB1P9-201ENST00000429856 646 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 HMGB1P18-201ENST00000438801 619 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC010099.1-201ENST00000455434 375 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 BX510359.1-201ENST00000456973 237 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC128713.1-201ENST00000471495 306 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC105029.1-201ENST00000520250 669 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 RAB11AP2-201ENST00000545905 639 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC025423.5-201ENST00000550230 219 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 AL391261.3-201ENST00000557194 520 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 APOOP1-201ENST00000604695 592 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC012468.1-201ENST00000604888 430 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 AC007179.3-201ENST00000604976 235 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 MTND4LP5-201ENST00000605152 292 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 RNU6-85P-201ENST00000605989 107 ntBASIC3.11□□□□□ -1.91
PKP3Q9Y446 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKP3Q9Y446 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.11□□□□□ -1.91
PKP3Q9Y446 MTND5P27-201ENST00000428871 1720 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKP3Q9Y446 Y_RNA.301-201ENST00000364990 103 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 RNU6-128P-201ENST00000383976 107 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
PKP3Q9Y446 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP3Q9Y446 RN7SL504P-201ENST00000494496 287 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms