Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SKP158-201ENST00000410453 326 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 RPL37P10-201ENST00000412884 288 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 SNAP23P1-201ENST00000433229 246 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 RPS24P13-201ENST00000442520 397 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-1153P-201ENST00000516760 105 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC087854.1-201ENST00000519706 414 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 FRG2DP-202ENST00000566967 323 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC138761.3-201ENST00000579993 334 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 APOOP1-201ENST00000604695 592 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC090132.2-201ENST00000615881 347 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.135-201ENST00000363439 95 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.245-201ENST00000364493 95 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.259-201ENST00000364619 101 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-741P-201ENST00000383889 107 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-1227P-201ENST00000383981 107 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 U3.26-201ENST00000391236 204 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 SAR1AP2-201ENST00000392696 594 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC005534.2-201ENST00000431047 433 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RPS3AP52-201ENST00000435639 297 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RPL32P28-201ENST00000443577 397 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 S100A11P2-201ENST00000467589 312 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RPS27P27-201ENST00000498779 255 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 MTND5P5-201ENST00000503764 376 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 SUMO2P6-201ENST00000505273 288 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC008716.1-201ENST00000511084 513 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RN7SKP24-201ENST00000515888 284 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-1315P-201ENST00000517187 99 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC069113.1-201ENST00000517763 267 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC068657.1-201ENST00000520807 306 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 COPS8P3-201ENST00000526024 482 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AL162713.1-201ENST00000604480 262 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AC004832.5-201ENST00000608677 401 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AL133215.3-201ENST00000609801 448 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 AL157817.1-201ENST00000614264 790 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 FAM157A-202ENST00000615155 405 ntBASIC3.54□□□□□ -1.84
SSX2IPQ9Y2D8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 ZNF519P1-201ENST00000449011 1626 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 MIR30E-201ENST00000362104 92 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-562P-201ENST00000362731 107 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-395P-201ENST00000365662 106 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 MIR578-201ENST00000384828 96 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 RNU2-33P-201ENST00000410344 192 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 Z99755.1-201ENST00000414048 380 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AL354751.2-201ENST00000415471 210 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 GPM6BP2-201ENST00000432046 144 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 GPM6BP1-201ENST00000446387 144 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 MTND1P17-201ENST00000448961 204 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AC008526.1-201ENST00000509149 338 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-323P-201ENST00000521915 107 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AP006245.1-201ENST00000522549 120 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AP005639.2-201ENST00000527592 928 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AL157871.3-201ENST00000557231 293 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 ANP32BP3-201ENST00000559213 706 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 AC073539.2-201ENST00000597113 165 ntBASIC3.53□□□□□ -1.84
SSX2IPQ9Y2D8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 Y_RNA.33-201ENST00000362591 102 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 SNORA63-201ENST00000363450 132 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 DYNLT3P1-201ENST00000378574 347 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 MTCO2P12-201ENST00000427426 682 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC007919.1-201ENST00000429380 217 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 FABP5P14-201ENST00000437273 393 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC009237.8-201ENST00000445492 379 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AL360271.2-201ENST00000447710 161 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 FABP5P15-201ENST00000453566 214 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC117503.1-201ENST00000472241 394 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 HMGB1P30-201ENST00000492455 606 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms