Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC012409.4-201ENST00000612923 249 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AL133173.2-201ENST00000614270 90 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AL359547.2-201ENST00000615810 418 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 ADAM3A-203ENST00000461344 2157 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 Y_RNA.33-201ENST00000362591 102 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 SNORA6-201ENST00000384033 151 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 SNORA75B-201ENST00000384053 137 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RNY3P9-201ENST00000384727 106 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RNA5SP425-201ENST00000410336 112 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-1025P-201ENST00000410629 104 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-1328P-201ENST00000410938 106 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RN7SKP142-201ENST00000411236 328 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-195P-201ENST00000411352 109 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 USP9YP6-201ENST00000413550 854 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL031779.1-201ENST00000415663 330 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 ISCA1P6-201ENST00000427740 390 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL031667.1-201ENST00000440222 725 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL161651.1-201ENST00000440882 223 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 MTCYBP1-201ENST00000454315 1119 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-572P-201ENST00000516724 80 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 SNORA31.19-201ENST00000517079 126 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 OR11H5P-201ENST00000554039 926 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC005261.5-201ENST00000596280 355 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 SEPT7P9-203ENST00000604116 343 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC073114.1-201ENST00000612027 490 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL158063.1-201ENST00000615349 536 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL449363.1-201ENST00000617815 186 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC022079.1-201ENST00000621546 602 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC138649.3-201ENST00000622154 254 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 DUXAP9-208ENST00000622815 614 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AC110994.2-201ENST00000635481 492 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 U6.99-201ENST00000637524 83 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 AL109809.4-201ENST00000603520 2185 ntBASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAPPC4Q9Y296 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC004520.1-201ENST00000608362 1413 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC010329.5-201ENST00000623497 2174 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-61P-201ENST00000365528 109 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-395P-201ENST00000365662 106 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-641P-201ENST00000384006 107 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-1083P-201ENST00000384022 107 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-166P-201ENST00000384371 107 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MICF-203ENST00000432679 129 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MTATP6P16-201ENST00000434543 526 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL078601.1-201ENST00000444542 271 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 FABP5P13-201ENST00000452144 328 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 SNORA31.6-201ENST00000516241 130 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 SNORA18.6-201ENST00000516792 115 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AP002453.2-201ENST00000533503 320 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL121821.2-201ENST00000556081 394 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 RPS3AP23-202ENST00000574601 686 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MIR4782-201ENST00000577987 79 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC110760.3-201ENST00000598794 467 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AL121992.2-201ENST00000606262 256 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 SNORD14A-201ENST00000606526 91 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MIR6873-201ENST00000622788 63 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 AC012640.5-201ENST00000623897 319 ntBASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAPPC4Q9Y296 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 SNORA11.4-201ENST00000408823 129 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms