Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC025588.3-201ENST00000604182 274 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 AL365222.1-201ENST00000614661 98 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 AC121333.1-201ENST00000567488 2709 ntBASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL17A1Q9UMD9 TNPO1P3-201ENST00000436471 2662 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RNU6-1255P-201ENST00000363434 112 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AL136372.1-201ENST00000403060 228 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AL603910.2-201ENST00000407268 136 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RNU2-33P-201ENST00000410344 192 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RNU6-603P-201ENST00000411403 107 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RPL23AP22-201ENST00000437556 453 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RPS29P31-201ENST00000446147 164 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RPS27P26-201ENST00000494583 239 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.654-201ENST00000497848 106 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AC008526.1-201ENST00000509149 338 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AC116337.1-201ENST00000509680 687 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RNA5SP384-201ENST00000516615 116 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 RNU6-798P-201ENST00000516912 103 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 MIR4319-201ENST00000577285 85 ntBASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL17A1Q9UMD9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.277-201ENST00000364754 102 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 Y_RNA.304-201ENST00000365011 112 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 RPL31P2-201ENST00000413849 377 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 AC010154.1-201ENST00000425857 269 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 RPS20P1-201ENST00000434853 354 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 SNORD97-201ENST00000459187 142 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 CBX3P8-201ENST00000532412 525 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 AL355812.1-201ENST00000603215 216 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 MIR4727-201ENST00000622232 55 ntBASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.09□□□□□ -1.59
COL17A1Q9UMD9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
COL17A1Q9UMD9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
COL17A1Q9UMD9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL17A1Q9UMD9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL17A1Q9UMD9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL17A1Q9UMD9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 RNU6-858P-201ENST00000362436 107 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 RNU6-511P-201ENST00000363496 107 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 U3.39-201ENST00000408569 239 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 RNU6-387P-201ENST00000411331 105 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 Z99755.1-201ENST00000414048 380 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AL139281.1-201ENST00000422120 335 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 EZH2P1-201ENST00000431167 291 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 CHEK2P4-201ENST00000450340 246 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AL353691.1-201ENST00000451332 387 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 FAM60DP-201ENST00000524174 632 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 KLKP1-201ENST00000595979 403 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AC073410.2-201ENST00000603240 332 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 AP001282.2-201ENST00000616149 309 ntBASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.08□□□□□ -1.6
COL17A1Q9UMD9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 SAGE4P-201ENST00000442271 3381 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 Y_RNA.8-201ENST00000362353 102 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 RNU6-1287P-201ENST00000362914 107 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 RNA5SP322-201ENST00000363617 119 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 RNU6-82P-201ENST00000363970 107 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 Y_RNA.551-201ENST00000384661 102 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 RNU6-1060P-201ENST00000384664 107 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 HMGN2P8-201ENST00000391458 268 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AL135938.1-201ENST00000443141 297 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AC016696.1-201ENST00000446949 318 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 LINC01399-202ENST00000458450 244 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 RN7SL594P-201ENST00000470590 287 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AP002884.2-201ENST00000471647 395 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 RNU6-897P-201ENST00000517135 105 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AP006245.1-201ENST00000522549 120 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AC090517.1-201ENST00000569307 266 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 MIR5583-1-201ENST00000580941 59 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 MIR5188-201ENST00000583467 113 ntBASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.07□□□□□ -1.6
COL17A1Q9UMD9 AL450472.1-202ENST00000637286 180 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms