Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC008521.1-201ENST00000587471 187 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 MIR6845-201ENST00000613182 61 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 AC091834.1-201ENST00000614543 472 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 AC009090.3-201ENST00000616553 565 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 AC009161.2-201ENST00000624626 138 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 SNORA26.9-201ENST00000391322 122 ntBASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AL160275.3-201ENST00000423876 471 ntBASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AC104389.3-201ENST00000445629 235 ntBASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AC019159.1-201ENST00000605094 187 ntBASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 uc_338.11-201ENST00000619132 160 ntBASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 AL157786.1-207ENST00000627771 695 ntBASIC4.45□□□□□ -1.7
SHROOM4Q9ULL8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 SNORA51.4-201ENST00000364993 124 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-1280P-201ENST00000365211 107 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 MIR1-2-201ENST00000384961 85 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 SNORA40C-201ENST00000391285 128 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC007677.1-201ENST00000445757 515 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 MTCYBP1-201ENST00000454315 1119 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 RNU7-182P-201ENST00000459009 62 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 KLF3P2-201ENST00000465138 268 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 RBBP4P6-201ENST00000508098 202 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC104806.1-201ENST00000508720 308 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 SNORA31.19-201ENST00000517079 126 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AP005136.1-201ENST00000579765 429 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 RSL24D1P11-201ENST00000591045 491 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC005261.5-201ENST00000596280 355 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AL022154.1-201ENST00000604698 785 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC245008.1-201ENST00000608123 476 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC099842.1-201ENST00000619919 596 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 AC093648.1-201ENST00000623546 606 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 SEPT14P19-203ENST00000633205 211 ntBASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHROOM4Q9ULL8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-74P-201ENST00000384235 107 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 SNORD88.1-201ENST00000408684 91 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 RPL7P37-201ENST00000425095 738 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 MTCO3P5-201ENST00000433620 714 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC018634.1-201ENST00000437554 401 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AL078601.1-201ENST00000444542 271 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-430P-201ENST00000517078 107 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 SNORA31.26-201ENST00000517250 137 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC026241.1-201ENST00000517873 2142 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AL121821.2-201ENST00000556081 394 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 SNORA68.1-201ENST00000364537 132 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 Y_RNA.508-201ENST00000384502 114 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 MIR454-201ENST00000390180 115 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 MTND4P32-201ENST00000437189 1237 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 BTF3P15-201ENST00000455606 336 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AL441985.1-201ENST00000457727 251 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 RPL23AP49-201ENST00000492925 468 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC116337.1-201ENST00000509680 687 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 OR5AL2P-201ENST00000532185 920 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC103810.1-201ENST00000579873 453 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 MIR5692A1-201ENST00000580523 69 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC098614.4-201ENST00000607601 462 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC097065.2-201ENST00000608159 533 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 AC009509.4-201ENST00000619202 509 ntBASIC4.43□□□□□ -1.7
SHROOM4Q9ULL8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-1180P-201ENST00000364935 107 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 RNU5A-6P-201ENST00000384136 116 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-19P-201ENST00000384718 107 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 Y_RNA.576-201ENST00000384781 102 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 Y_RNA.595-201ENST00000410403 105 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 RPL23AP36-201ENST00000413895 458 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 SDCBPP3-201ENST00000419629 891 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 MTCYBP5-201ENST00000423752 1135 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 Z98742.2-201ENST00000431564 187 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 C1DP4-201ENST00000455429 424 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms