Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL121594.1-201ENST00000475906 575 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC024589.1-201ENST00000512207 263 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNY4P37-201ENST00000516225 96 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNU2-53P-201ENST00000516257 147 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNU6-572P-201ENST00000516724 80 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNU6-334P-201ENST00000517072 102 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RPS3AP4-201ENST00000555161 764 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC104072.1-201ENST00000568817 668 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 BNIP3P27-201ENST00000599991 412 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC073413.2-201ENST00000604332 360 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC025754.2-201ENST00000606491 432 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC098614.4-201ENST00000607601 462 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC093788.1-201ENST00000609356 927 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC004908.3-201ENST00000610248 625 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 MIR8074-201ENST00000615081 81 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AL132822.1-201ENST00000617063 513 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC090517.3-201ENST00000625170 141 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AP000560.1-201ENST00000624150 1937 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 Y_RNA.408-201ENST00000383987 102 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 RNU6-546P-201ENST00000383991 107 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 RNU6-1274P-201ENST00000384557 107 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 RNA5SP100-201ENST00000410903 110 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 RNA5SP59-201ENST00000410922 110 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 SRIP3-201ENST00000413200 219 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC138623.1-201ENST00000418060 216 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 RPL17P35-201ENST00000432217 549 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 MTCYBP42-201ENST00000444653 1130 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC021451.1-201ENST00000523498 1129 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC084364.2-201ENST00000546924 395 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 MIR3912-201ENST00000577566 105 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC004987.4-201ENST00000603383 338 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AL133445.2-201ENST00000611191 527 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 uc_338.12-201ENST00000616344 181 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC005858.4-201ENST00000623191 700 ntBASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.16□□□□□ -2.22
VPS29Q9UBQ0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
VPS29Q9UBQ0 ZNF29P-201ENST00000225587 168 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 MIR186-201ENST00000384988 86 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 SNORA48.1-201ENST00000390879 135 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 MTND3P20-201ENST00000407663 186 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AL592045.1-201ENST00000429867 352 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AC132942.1-201ENST00000486753 483 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 RPF2P2-201ENST00000504693 896 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AC009902.1-201ENST00000519351 183 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AP003034.1-201ENST00000534621 422 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AC023043.2-201ENST00000589678 1026 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 WISP1-OT1-201ENST00000602893 642 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 Z82243.1-201ENST00000609432 473 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AC090970.3-201ENST00000612566 866 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 AP000676.3-201ENST00000623299 569 ntBASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS29Q9UBQ0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 CBX3P1-201ENST00000325243 554 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AL603865.2-201ENST00000401679 213 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 FTH1P15-201ENST00000406984 280 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AC005094.1-201ENST00000440420 368 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AC104058.1-201ENST00000448028 297 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 DEFB131D-201ENST00000526803 184 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AC022616.8-201ENST00000533569 253 ntBASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.14□□□□□ -2.23
VPS29Q9UBQ0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms