Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL138880.2-201ENST00000616214 239 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
NCKIPSDQ9NZQ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 FTLP6-201ENST00000355274 422 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR422A-201ENST00000362286 90 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-217P-201ENST00000384164 104 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 MTND4P19-201ENST00000446659 478 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 MTND4P17-201ENST00000470444 350 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-914P-201ENST00000516749 109 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 RNA5SP165-201ENST00000517142 115 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC005668.1-201ENST00000571142 476 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AL355375.2-201ENST00000574825 175 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC004805.2-201ENST00000605382 482 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC091903.1-201ENST00000624322 454 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR1302-1-201ENST00000637932 143 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 AC121333.1-201ENST00000567488 2709 ntBASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
NCKIPSDQ9NZQ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-715P-201ENST00000365204 103 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AL139039.1-201ENST00000401900 692 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU2-68P-201ENST00000410878 191 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 POLHP1-201ENST00000411806 470 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 BX682237.1-201ENST00000415016 335 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AL354751.2-201ENST00000415471 210 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 SNRPEP9-201ENST00000436794 238 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC233279.1-201ENST00000455300 423 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RPL12P25-201ENST00000455592 494 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 snoU13.28-201ENST00000459235 104 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-864P-201ENST00000516256 108 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU1-103P-201ENST00000516502 125 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 RN7SKP256-201ENST00000517201 314 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 AC092747.3-201ENST00000603769 301 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR15A-201ENST00000607334 83 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 Z82243.1-201ENST00000609432 473 ntBASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKIPSDQ9NZQ3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-7-201ENST00000364784 107 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RNU6-8-201ENST00000365467 107 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 MIR301A-201ENST00000385261 86 ntBASIC3.19□□□□□ -1.9
NCKIPSDQ9NZQ3 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms