Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC026464.5-201ENST00000562497 722 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 RPS3AP23-202ENST00000574601 686 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 MIR4742-201ENST00000581069 85 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 Z82243.1-201ENST00000609432 473 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AC022140.2-201ENST00000623500 188 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 AL512643.1-201ENST00000635735 524 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 MTND1P37-201ENST00000636562 264 ntBASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.98□□□□□ -1.93
SMARCAL1Q9NZC9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC008568.2-201ENST00000623862 2313 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 MIR422A-201ENST00000362286 90 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.61-201ENST00000362835 102 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.100-201ENST00000363141 102 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 RNA5SP387-201ENST00000364226 106 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 U3.12-201ENST00000364498 214 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 MIR325-201ENST00000385260 98 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 MIR1290-201ENST00000408735 78 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 MTND3P8-201ENST00000412909 339 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 RPL21P90-201ENST00000415692 466 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 ARL5AP1-201ENST00000418991 388 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AL139281.1-201ENST00000422120 335 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC022018.1-201ENST00000430685 241 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 RNU7-66P-201ENST00000459469 62 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-329P-201ENST00000459618 107 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC091826.1-201ENST00000514065 313 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 RNU2-69P-201ENST00000516061 100 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 RN7SKP256-201ENST00000517201 314 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AP001804.3-201ENST00000525146 880 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AP000763.2-201ENST00000540641 163 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 VN1R80P-201ENST00000597126 338 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 AL133216.2-202ENST00000634512 349 ntBASIC2.97□□□□□ -1.93
SMARCAL1Q9NZC9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.96□□□□□ -1.93
SMARCAL1Q9NZC9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.166-201ENST00000363730 102 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.184-201ENST00000363884 108 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-82P-201ENST00000363970 107 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-694P-201ENST00000364071 147 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-371P-201ENST00000364283 108 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 MIR578-201ENST00000384828 96 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RPL5P18-201ENST00000406671 891 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RN7SKP32-201ENST00000410167 303 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 ATG3P1-201ENST00000419507 911 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL365400.1-201ENST00000431854 640 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL591704.1-201ENST00000432574 275 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AC009237.8-201ENST00000445492 379 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AMD1P1-201ENST00000457220 922 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 PPP1R2P5-201ENST00000457256 603 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RPL37P6-201ENST00000460682 294 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RPS15AP34-201ENST00000487776 387 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 MTND3P22-201ENST00000510932 243 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-189P-201ENST00000516120 101 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 SCARNA13-201ENST00000516672 275 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-273P-201ENST00000516937 96 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 RNA5SP290-201ENST00000517133 127 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AP002404.1-201ENST00000532005 451 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 ELOCP31-201ENST00000540463 467 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 DNAJC8P1-201ENST00000554535 372 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AC010653.1-201ENST00000571108 881 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 MIR3942-201ENST00000585264 109 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AC005498.1-201ENST00000592125 465 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AC243960.4-201ENST00000600532 288 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL121757.2-201ENST00000611223 313 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AL359697.1-201ENST00000624879 587 ntBASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SMARCAL1Q9NZC9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC009487.2-201ENST00000420969 6821 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU4-73P-201ENST00000363164 141 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.245-201ENST00000364493 95 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1303P-201ENST00000364841 107 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms