Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.56□□□□□ -2
CHCHD3Q9NX63 SUB1P2-201ENST00000556401 297 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 MIR5680-201ENST00000577577 84 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 MIR5004-201ENST00000579078 107 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 LRRC37A5P-203ENST00000580181 585 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 PIGPP4-201ENST00000584447 307 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.56□□□□□ -2
CHCHD3Q9NX63 AC010620.1-201ENST00000601088 1102 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 AP001596.2-201ENST00000608410 312 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 AC009090.3-201ENST00000616553 565 ntBASIC2.56□□□□□ -2
CHCHD3Q9NX63 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.56□□□□□ -2
CHCHD3Q9NX63 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHCHD3Q9NX63 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
CHCHD3Q9NX63 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CHCHD3Q9NX63 OR56A5-201ENST00000340110 738 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 RNU6-1042P-201ENST00000384204 107 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 U3.40-201ENST00000408706 208 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 RNU2-29P-201ENST00000410423 189 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 RNU6-607P-201ENST00000411283 108 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 RPL21P90-201ENST00000415692 466 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 MTATP6P18-201ENST00000417994 673 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 AC003685.2-201ENST00000422795 395 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 AC005326.1-201ENST00000429197 123 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 MTCO2P11-201ENST00000431069 680 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 RPL7P43-201ENST00000478876 753 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 HSPA8P4-201ENST00000511877 1920 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 AC114781.4-201ENST00000513707 639 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 MIR4703-201ENST00000577728 79 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 Z84480.1-201ENST00000605131 311 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 U4atac.1-201ENST00000618345 95 ntBASIC2.55□□□□□ -2
CHCHD3Q9NX63 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.55□□□□□ -2
CHCHD3Q9NX63 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHCHD3Q9NX63 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 RNU6-858P-201ENST00000362436 107 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 RNU6-1010P-201ENST00000362757 107 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 RNU6-942P-201ENST00000363002 107 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 SNORA71.1-201ENST00000364523 117 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 RNA5SP240-201ENST00000365355 128 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 RNU6-116P-201ENST00000384042 109 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 RNU6-1029P-201ENST00000384109 107 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 MIR490-201ENST00000384865 128 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 UBA52P6-201ENST00000399822 382 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC073464.1-201ENST00000429823 534 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 MTCO2P16-201ENST00000436962 677 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 MTCO1P19-201ENST00000443487 500 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AL360221.1-201ENST00000445989 335 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 MTND1P18-201ENST00000448191 573 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 RPS27P21-201ENST00000486977 252 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.54□□□□□ -2
CHCHD3Q9NX63 AGGF1P4-201ENST00000568249 801 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 RSL24D1P11-201ENST00000591045 491 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC009509.4-201ENST00000619202 509 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC010378.1-201ENST00000619270 362 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 AL031601.2-202ENST00000622650 282 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHCHD3Q9NX63 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHCHD3Q9NX63 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
CHCHD3Q9NX63 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 RNU6-384P-201ENST00000364900 104 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 SNORD116-2-201ENST00000384274 95 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 SNORD116-1-201ENST00000384335 95 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 Y_RNA.480-201ENST00000384364 102 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 RNU6-45P-201ENST00000384471 107 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 SNORD116-6-201ENST00000384711 96 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 MIR218-1-201ENST00000384999 110 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 Y_RNA.582-201ENST00000391023 95 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 OR9R1P-201ENST00000412200 877 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
CHCHD3Q9NX63 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.53□□□□□ -2
CHCHD3Q9NX63 CYP2C59P-201ENST00000457790 269 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms