Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-541P-201ENST00000384709 110 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 MIR10B-201ENST00000385011 110 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 MIR329-1-201ENST00000385028 80 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-1248P-201ENST00000391096 64 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 AL357134.1-201ENST00000445848 426 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 FABP5P15-201ENST00000453566 214 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RPL23AP24-201ENST00000458203 385 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RPS23P7-201ENST00000466210 444 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RN7SL459P-201ENST00000481078 302 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 AC008897.1-201ENST00000494006 347 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 AC107027.2-201ENST00000512197 115 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RNU1-61P-201ENST00000516107 151 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RN7SKP179-201ENST00000516126 217 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 AC115990.1-201ENST00000526957 301 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 PARP1P2-201ENST00000556806 195 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 AL020997.2-201ENST00000602607 184 ntBASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CUEDC1Q9NWM3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 AC018529.3-201ENST00000624212 2254 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 Y_RNA.542-201ENST00000384641 111 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 CYCSP32-201ENST00000440548 321 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 RPS20P22-201ENST00000473700 357 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 AC008033.2-201ENST00000542626 177 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 MIR4737-201ENST00000583979 81 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 AC083809.1-201ENST00000615051 472 ntBASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CUEDC1Q9NWM3 AL391516.1-201ENST00000554380 2449 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-270P-201ENST00000364131 105 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 Y_RNA.420-201ENST00000384043 110 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-1197P-201ENST00000391183 107 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-1001P-201ENST00000411265 100 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 YPEL5P1-201ENST00000419731 367 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC091390.3-201ENST00000426478 338 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 RPS20P10-201ENST00000451209 253 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 HMGN2P16-201ENST00000456802 261 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 RN7SL319P-201ENST00000480656 221 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC020593.1-201ENST00000507399 299 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC090616.3-201ENST00000582184 217 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 MIR6780A-201ENST00000615089 68 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC087385.3-201ENST00000620477 187 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AC087190.4-201ENST00000574616 8334 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 AL672167.1-204ENST00000641875 3017 ntBASIC4.78□□□□□ -1.64
CUEDC1Q9NWM3 FAM35BP-202ENST00000497389 3337 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 AL133383.2-201ENST00000622958 2336 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 RNU4-80P-201ENST00000363200 141 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 RNU6-429P-201ENST00000384582 108 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 SNORA20-201ENST00000384662 132 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 RNU6-159P-201ENST00000391080 106 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 SNORA40C-201ENST00000391285 128 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 BTF3P11-201ENST00000426582 477 ntBASIC4.77□□□□□ -1.65
CUEDC1Q9NWM3 AC140172.1-201ENST00000502928 141 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms