Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 MIR3913-1-201ENST00000577744 102 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MIR5571-201ENST00000577998 113 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MIR4658-201ENST00000584344 65 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC110760.3-201ENST00000598794 467 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MIR7106-201ENST00000612419 65 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC072046.2-201ENST00000618366 268 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 U6.114-201ENST00000636407 96 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 Z75746.1-201ENST00000440243 2080 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 SNORA62.1-201ENST00000364287 154 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 RNU6-282P-201ENST00000365357 103 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 RNU6-348P-201ENST00000384386 107 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 MIR1-2-201ENST00000384961 85 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 OR6C66P-201ENST00000414917 930 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 NUP35P1-201ENST00000422734 947 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC022364.2-201ENST00000457963 554 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC073901.1-201ENST00000462471 408 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 MED28P2-201ENST00000475771 317 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC096576.1-201ENST00000489014 359 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 MTAPP1-201ENST00000489154 819 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 RNU5B-3P-201ENST00000516601 115 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 RNU6-430P-201ENST00000517078 107 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 RPL7P20-201ENST00000520308 745 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 MTND2P38-201ENST00000522536 667 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AP000873.5-201ENST00000533906 236 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC079598.5-201ENST00000547460 117 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC009163.5-201ENST00000575421 637 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 MIR5692A1-201ENST00000580523 69 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 MIR5007-201ENST00000583098 95 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC068790.2-201ENST00000602601 557 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC006023.1-201ENST00000603944 259 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC099842.1-201ENST00000619919 596 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC022079.1-201ENST00000621546 602 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 AC011155.2-201ENST00000623202 216 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 SCARNA4-202ENST00000625402 129 ntBASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCL28Q9NRJ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC138393.1-203ENST00000327086 343 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU6-858P-201ENST00000362436 107 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU6-942P-201ENST00000363002 107 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU6-181P-201ENST00000363225 107 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU6-371P-201ENST00000364283 108 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU6-384P-201ENST00000364900 104 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL133475.1-201ENST00000404414 305 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 USP9YP27-201ENST00000418455 438 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC097463.2-201ENST00000421074 142 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RPS3AP44-201ENST00000425466 790 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 WARS2P1-201ENST00000429678 537 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC236972.1-201ENST00000433225 199 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC018634.1-201ENST00000437554 401 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AL109933.2-201ENST00000452651 260 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 C1DP4-201ENST00000455429 424 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RPS3P1-201ENST00000456781 192 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNU7-182P-201ENST00000459009 62 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC112771.1-201ENST00000463581 102 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RPL7P43-201ENST00000478876 753 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 HMGB1P30-201ENST00000492455 606 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 SMURF2P1-201ENST00000514992 481 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 SNORA25.11-201ENST00000515935 105 ntBASIC1.85□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP356-201ENST00000515972 94 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms