Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC107032.1-201ENST00000485945 480 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC010486.1-201ENST00000511793 424 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 RNU6-1315P-201ENST00000517187 99 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC011979.2-201ENST00000527568 352 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC135279.1-201ENST00000543493 504 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC008015.1-201ENST00000555505 465 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 MTATP6P24-201ENST00000576835 677 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC012213.3-201ENST00000577199 777 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AL022161.1-201ENST00000604390 213 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC009159.2-201ENST00000617603 606 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC092140.2-201ENST00000618027 521 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 AC009878.1-201ENST00000621819 340 ntBASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
EXOSC4Q9NPD3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RNU5E-1-201ENST00000362477 120 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RNU6-190P-201ENST00000384154 102 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RNU6-166P-201ENST00000384371 107 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 MIR518D-201ENST00000385014 87 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 SNORA40C-201ENST00000391285 128 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 Z98742.3-201ENST00000418637 326 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AL591704.1-201ENST00000432574 275 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 USP9YP12-201ENST00000450481 570 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 BTF3P15-201ENST00000455606 336 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RPL36AP48-201ENST00000485521 314 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 MTAPP1-201ENST00000489154 819 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RPL9P6-201ENST00000492764 598 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC023194.1-201ENST00000493084 308 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 MTND4P2-201ENST00000507767 1203 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC005178.1-201ENST00000508392 440 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RNU7-51P-201ENST00000516560 62 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AL157871.3-201ENST00000557231 293 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC002400.1-201ENST00000569310 726 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 MIR1273C-201ENST00000578669 77 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC090616.2-202ENST00000584248 222 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC018638.7-201ENST00000605836 1114 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AP002360.4-201ENST00000606980 481 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC138749.5-201ENST00000611461 208 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC116165.2-201ENST00000616705 206 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC244517.12-201ENST00000623581 663 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 AC064859.1-201ENST00000624741 174 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 MIR219B-201ENST00000637023 88 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 CDC27P3-201ENST00000635418 1910 ntBASIC1.69□□□□□ -2.14
EXOSC4Q9NPD3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 RNA5SP276-201ENST00000362580 94 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 SNORA64-201ENST00000384674 134 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 MRPL42P2-201ENST00000403169 426 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC016831.2-201ENST00000417179 352 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 DPH3P2-201ENST00000422618 250 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AL078601.1-201ENST00000444542 271 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AL583843.1-201ENST00000456070 346 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 PMCHL2-203ENST00000457791 237 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 snoU109.2-201ENST00000459316 135 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC112771.1-201ENST00000463581 102 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC026801.1-201ENST00000497178 464 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC109446.2-201ENST00000567872 497 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 MIR4529-201ENST00000578110 78 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AL109918.3-201ENST00000603072 338 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC112191.3-201ENST00000604371 277 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AC087683.2-201ENST00000611384 326 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 AL590808.1-201ENST00000618696 141 ntBASIC1.68□□□□□ -2.14
EXOSC4Q9NPD3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms