Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL21P39-201ENST00000463605 483 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC087190.1-201ENST00000484462 480 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC107032.1-201ENST00000485945 480 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC132942.1-201ENST00000486753 483 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC093591.1-201ENST00000491435 481 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 RPL21P16-201ENST00000495531 483 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 SCARNA24.2-201ENST00000516968 130 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AP004371.1-201ENST00000525240 214 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC093023.1-201ENST00000547375 507 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 HNRNPCP4-201ENST00000571636 900 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC136932.1-201ENST00000574771 208 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 MIR6867-201ENST00000610636 67 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 MIR7151-201ENST00000617477 60 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 ZYXP1-201ENST00000617638 118 ntBASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SEC61A2Q9H9S3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL365440.1-201ENST00000436135 2167 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL157777.2-201ENST00000258070 137 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 DEFB108F-201ENST00000344638 222 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 MIR372-201ENST00000362225 67 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP515-201ENST00000364570 118 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 U3.13-201ENST00000364804 214 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RPS26P8-201ENST00000393490 348 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RNU2-71P-201ENST00000411395 189 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 TOMM22P1-201ENST00000418578 312 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL627311.1-201ENST00000431514 115 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP246-201ENST00000458909 119 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL160314.1-201ENST00000490836 438 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RN7SL604P-201ENST00000492589 296 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-377P-201ENST00000515965 102 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RN7SKP21-201ENST00000516503 220 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 SNORA31.19-201ENST00000517079 126 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL442163.3-201ENST00000554110 156 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 MIR4300-201ENST00000581016 96 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AC023043.4-201ENST00000612081 449 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL591424.2-201ENST00000617023 128 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 AL592437.2-201ENST00000421655 2434 ntBASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.61□□□□□ -1.83
SEC61A2Q9H9S3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 SNORA60-201ENST00000362396 134 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.29-201ENST00000362570 113 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.555-201ENST00000384673 110 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 SNORD115-46-201ENST00000390982 71 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 MIR1251-201ENST00000408552 70 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 SNORA3C-201ENST00000408792 125 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AP000275.1-201ENST00000411943 390 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL356095.1-201ENST00000417217 199 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC244098.2-201ENST00000422068 99 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL358472.1-201ENST00000431295 329 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 PIGFP3-201ENST00000441918 722 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 RN7SKP210-201ENST00000459176 261 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 RPS29P27-201ENST00000463711 170 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 TOMM22P6-201ENST00000465035 409 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms