Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 MIR320C1-201ENST00000408566 88 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC019070.1-201ENST00000415008 1024 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC083875.1-201ENST00000419509 405 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 SNORD97-201ENST00000459187 142 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC016550.1-201ENST00000505348 785 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC025465.3-201ENST00000510570 311 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 SNORA25.15-201ENST00000516487 89 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 RNU6-678P-201ENST00000516832 109 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC023813.2-201ENST00000564321 469 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 MIR4782-201ENST00000577987 79 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3BQ9H321 AL596327.1-201ENST00000603629 213 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AL358072.1-201ENST00000604156 575 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VCX3BQ9H321 NDUFA8P1-201ENST00000605525 367 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC034229.4-201ENST00000607861 441 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 PART1_2.1-201ENST00000612397 250 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AC090970.3-201ENST00000612566 866 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 AL392048.1-201ENST00000613946 534 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 RNU5A-8P-201ENST00000364102 114 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 RNU6-898P-201ENST00000365627 104 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 RNU6-439P-201ENST00000384188 106 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 SNORD116-12-201ENST00000384468 92 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 RNU6-14P-201ENST00000384630 106 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 MIR504-201ENST00000385065 83 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VCX3BQ9H321 RNU6-817P-201ENST00000391083 104 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 RN7SKP192-201ENST00000411291 327 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 Z92545.1-201ENST00000411782 234 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.17□□□□□ -2.22
VCX3BQ9H321 HMGB1P31-201ENST00000437242 427 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 AL117351.1-201ENST00000438864 766 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 RPL7P43-201ENST00000478876 753 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.17□□□□□ -2.22
VCX3BQ9H321 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.17□□□□□ -2.22
VCX3BQ9H321 DEFB108A-201ENST00000530110 222 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
VCX3BQ9H321 RNU6-91P-201ENST00000607774 107 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 AC091834.1-201ENST00000614543 472 ntBASIC1.17□□□□□ -2.22
VCX3BQ9H321 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VCX3BQ9H321 Y_RNA.192-201ENST00000363977 102 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 RNA5SP387-201ENST00000364226 106 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 RNU6-1032P-201ENST00000384100 107 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 MIR483-201ENST00000385070 76 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 ERHP2-201ENST00000402323 299 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 MTCYBP18-201ENST00000501056 747 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 RNU6-276P-201ENST00000516114 96 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 SNORA19.3-201ENST00000516165 130 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 RNU6-572P-201ENST00000516724 80 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC010376.1-201ENST00000522101 334 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 RPS3AP4-201ENST00000555161 764 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC087045.1-201ENST00000605856 382 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC107952.2-201ENST00000606048 486 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 RMST_6.1-201ENST00000611980 203 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC091965.5-201ENST00000624785 342 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.16□□□□□ -2.22
VCX3BQ9H321 MTND5P9-201ENST00000503854 1755 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 AC092125.1-201ENST00000562568 1995 ntBASIC1.16□□□□□ -2.22
VCX3BQ9H321 RNU6-462P-201ENST00000362659 105 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 RNU6-701P-201ENST00000384059 107 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
VCX3BQ9H321 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC092648.1-201ENST00000425870 423 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 TXNL1P1-201ENST00000429528 554 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC117522.2-201ENST00000510049 657 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 RNU6-467P-201ENST00000517027 110 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 SNORA31.19-201ENST00000517079 126 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AP003122.4-201ENST00000530980 758 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC015720.1-201ENST00000565251 277 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC002400.1-201ENST00000569310 726 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 BNIP3P27-201ENST00000599991 412 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC097468.3-201ENST00000607956 456 ntBASIC1.15□□□□□ -2.23
VCX3BQ9H321 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms