Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-377P-201ENST00000515965 102 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RNA5SP154-201ENST00000516193 111 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 MIR4330-201ENST00000579077 105 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AL359881.1-201ENST00000602916 267 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RAD17P1-201ENST00000418130 2042 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RNU4-84P-201ENST00000364200 139 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.217-201ENST00000364214 105 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RNU4-56P-201ENST00000364700 142 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 MIR192-201ENST00000384915 110 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RNU1-139P-201ENST00000391307 165 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RPS16P5-201ENST00000406501 404 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AC011742.1-201ENST00000431448 434 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 POLR2KP2-201ENST00000438155 177 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 TPT1P12-201ENST00000448968 492 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RPL23AP3-201ENST00000453844 468 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.641-201ENST00000459414 105 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 snoU13.3-201ENST00000459441 104 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AP000870.1-201ENST00000472927 406 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RPL21P13-201ENST00000488305 481 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RPL23AP75-201ENST00000491601 451 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AC025445.1-201ENST00000502728 300 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AC006499.6-201ENST00000511169 607 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-567P-201ENST00000516746 107 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RPL23AP97-201ENST00000568955 471 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 RN7SL690P-201ENST00000582087 240 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 KLKP1-201ENST00000595979 403 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AC234771.5-201ENST00000600161 514 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 MFSD8-242ENST00000641690 4199 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 AC022893.2-201ENST00000564832 3296 ntBASIC4.87□□□□□ -1.63
NUCKS1Q9H1E3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-626P-201ENST00000363354 107 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.127-201ENST00000363386 109 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-1325P-201ENST00000364905 105 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-1175P-201ENST00000365200 107 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 BTF3L4P2-201ENST00000392798 346 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 RN7SKP167-201ENST00000411047 285 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 IFNA11P-201ENST00000446352 526 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AC012671.1-201ENST00000451912 203 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 HMGB3P3-201ENST00000510526 400 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-1114P-201ENST00000516022 107 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AC233702.2-202ENST00000562547 291 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AL133393.1-201ENST00000603277 287 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 MIR6748-201ENST00000610433 71 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 RMST_6.1-201ENST00000611980 203 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 uc_338.32-201ENST00000615087 172 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.778-201ENST00000620203 90 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AL353748.2-201ENST00000622148 471 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AC007546.2-201ENST00000623996 360 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.86□□□□□ -1.63
NUCKS1Q9H1E3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 A2MP1-204ENST00000566278 4130 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 RNU1-15P-201ENST00000353977 144 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.218-201ENST00000364218 104 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-312P-201ENST00000364629 107 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 SNORA56-201ENST00000383966 129 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-20P-201ENST00000384106 107 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 MIR32-201ENST00000384965 70 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 UBA52P6-201ENST00000399822 382 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 AL390729.2-201ENST00000416137 156 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 PPIAP21-201ENST00000464473 501 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 RN7SL738P-201ENST00000470264 297 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 AC020593.1-201ENST00000507399 299 ntBASIC4.85□□□□□ -1.63
NUCKS1Q9H1E3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms