Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR3199-2-201ENST00000636243 86 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RNU6-858P-201ENST00000362436 107 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RNA5SP51-201ENST00000364750 119 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 SNORA5A-201ENST00000384111 134 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RNU6-890P-201ENST00000384121 107 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RNU6-331P-201ENST00000384724 107 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RNA5SP424-201ENST00000390988 115 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 SNORA48.7-201ENST00000391302 135 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RNA5SP38-201ENST00000410750 119 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 AL117339.3-201ENST00000418733 162 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 AC012308.1-201ENST00000451232 178 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RPL23AP14-201ENST00000468281 468 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 RPL7P47-201ENST00000497299 556 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 SMURF2P1-201ENST00000514992 481 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 MIR4429-201ENST00000580105 73 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 MIR4444-1-201ENST00000581696 74 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 MIR4444-2-201ENST00000584390 74 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 AC011890.2-201ENST00000613393 294 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 MIR6134-201ENST00000617606 109 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC113Q9H0I3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC113Q9H0I3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC113Q9H0I3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC113Q9H0I3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC113Q9H0I3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 SNORA62.3-201ENST00000365110 153 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 RNU6-474P-201ENST00000384243 107 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 MIR518D-201ENST00000385014 87 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 BPY2DP-201ENST00000422208 265 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 AL133396.1-201ENST00000432048 687 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 AL591043.1-201ENST00000432461 424 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 GOT2P5-201ENST00000433995 546 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 MTCYBP6-201ENST00000441810 138 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 AC010099.1-201ENST00000455434 375 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 MIR2053-201ENST00000459295 91 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 SNORA43.2-201ENST00000516652 128 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 AC026403.1-201ENST00000518938 295 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 AC020661.2-201ENST00000560114 134 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 MIR3171-201ENST00000584270 74 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 HMGN2P15-201ENST00000585707 270 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 AC024153.1-201ENST00000603103 365 ntBASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC113Q9H0I3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC110491.1-201ENST00000562191 2010 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 RNU1-18P-201ENST00000363062 164 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AL359837.1-201ENST00000381357 287 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 RNU6-1040P-201ENST00000383974 107 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 RNU6-198P-201ENST00000384258 104 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 SNORA75.6-201ENST00000391318 127 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 HMGN2P8-201ENST00000391458 268 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AL035423.1-201ENST00000420331 213 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 NIPA2P5-201ENST00000452282 464 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC090096.1-201ENST00000489168 390 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 SNRPGP18-201ENST00000553000 214 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC005476.1-201ENST00000554427 397 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 AC021739.1-201ENST00000559631 174 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 CPDP1-201ENST00000579660 283 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 SRGNP1-201ENST00000603392 451 ntBASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC113Q9H0I3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 Y_RNA.202-201ENST00000364083 110 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 Y_RNA.326-201ENST00000365176 113 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 RNU6-842P-201ENST00000384269 107 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 PTMAP5-201ENST00000393073 333 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 RNU6-1245P-201ENST00000411130 106 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC113Q9H0I3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms