Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 IMMP1LP2-201ENST00000552954 492 ntBASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 AL161629.2-201ENST00000615347 275 ntBASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 AC090574.1-201ENST00000623186 233 ntBASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM54Q9BYV2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 Y_RNA.431-201ENST00000384086 102 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 Y_RNA.482-201ENST00000384377 111 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 RNU6-601P-201ENST00000384540 107 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 BPY2DP-201ENST00000422208 265 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 CYCSP4-201ENST00000429682 331 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 RPS15AP10-201ENST00000432472 382 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC098831.1-201ENST00000440661 216 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC034236.1-201ENST00000469891 373 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC104619.4-201ENST00000510773 249 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 TRMT10BP1-201ENST00000519377 943 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 HMGN2P15-201ENST00000585707 270 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AL451007.1-201ENST00000595491 289 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC004852.3-201ENST00000614131 326 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AL121772.2-201ENST00000614331 297 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 MIR6128-201ENST00000615528 109 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 MIR6134-201ENST00000617606 109 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM54Q9BYV2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 SNORD62.1-201ENST00000362541 86 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 SNORA5A-201ENST00000384111 134 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 RNA5SP252-201ENST00000391131 119 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 MTCO2P27-201ENST00000420740 428 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AP000907.1-201ENST00000428428 510 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC010265.1-201ENST00000513509 211 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 FRG2DP-202ENST00000566967 323 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AL160281.1-201ENST00000605307 311 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC064836.2-201ENST00000609491 462 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 SNORA50A-202ENST00000629536 136 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 MIR3199-2-201ENST00000636243 86 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AL513302.2-201ENST00000562313 1842 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM54Q9BYV2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC017071.1-201ENST00000564407 2204 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU6-933P-201ENST00000384424 107 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 MIR518D-201ENST00000385014 87 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 MIR134-201ENST00000385258 73 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU6-370P-201ENST00000411008 104 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC006946.1-201ENST00000429106 328 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL714022.1-201ENST00000439897 151 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 CYCSP32-201ENST00000440548 321 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 HMGN2P10-201ENST00000448085 265 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL133547.1-201ENST00000448546 220 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU7-23P-201ENST00000459465 62 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC106707.2-201ENST00000484182 374 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 HMGN1P13-201ENST00000505795 138 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC116337.1-201ENST00000509680 687 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU6-377P-201ENST00000515965 102 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms