Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 Y_RNA.399-201ENST00000383955 105 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC138623.1-201ENST00000418060 216 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC097463.2-201ENST00000421074 142 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 MICF-203ENST00000432679 129 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 RNU7-167P-201ENST00000459160 62 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC112771.1-201ENST00000463581 102 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 RNU4-29P-201ENST00000515943 174 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 SNORA43.2-201ENST00000516652 128 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 EIF1P4-201ENST00000572664 335 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 MIR5583-1-201ENST00000580941 59 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AL021997.1-201ENST00000605757 193 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HERPUD2Q9BSE4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 Z75746.1-201ENST00000440243 2080 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 Y_RNA.3-201ENST00000362331 103 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 Y_RNA.372-201ENST00000365599 102 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-843P-201ENST00000384454 104 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL21P75-201ENST00000396599 483 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL21P28-201ENST00000401418 483 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AL592114.1-201ENST00000403842 483 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL7P10-201ENST00000417407 739 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AL121601.2-201ENST00000438019 707 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL21P39-201ENST00000463605 483 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL23AP11-201ENST00000475260 469 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL21P93-201ENST00000480465 489 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC087190.1-201ENST00000484462 480 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC093591.1-201ENST00000491435 481 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RPL21P16-201ENST00000495531 483 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-1281P-201ENST00000516223 105 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC069113.1-201ENST00000517763 267 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 MIR3200-201ENST00000580767 85 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC092954.2-201ENST00000609103 430 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HERPUD2Q9BSE4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 RNU4-66P-201ENST00000365199 138 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 MIR181A1-201ENST00000385026 110 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 OR9R1P-201ENST00000412200 877 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 RPL9P33-201ENST00000484311 566 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC096576.1-201ENST00000489014 359 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 RN7SL504P-201ENST00000494496 287 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 SNORA25.11-201ENST00000515935 105 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC016957.1-201ENST00000534895 309 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 MTCO3P23-201ENST00000561363 289 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC021646.1-201ENST00000605469 484 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC002044.1-201ENST00000606707 158 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 AC069294.1-201ENST00000608397 350 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 RMST_7.1-201ENST00000621935 268 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 Z69720.2-201ENST00000624755 279 ntBASIC3.17□□□□□ -1.9
HERPUD2Q9BSE4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 RNU6-37P-201ENST00000362692 107 ntBASIC3.16□□□□□ -1.9
HERPUD2Q9BSE4 SNORD114-19-201ENST00000363072 75 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms