Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNA5SP200-201ENST00000516360 103 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 RNU7-193P-201ENST00000516723 65 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
FOXC2Q99958 AC022616.6-201ENST00000520479 119 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC022878.1-201ENST00000530684 149 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC118273.2-201ENST00000532092 465 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 CYCSP26-201ENST00000534107 320 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXC2Q99958 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXC2Q99958 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.87□□□□□ -2.11
FOXC2Q99958 AC109446.2-201ENST00000567872 497 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.87□□□□□ -2.11
FOXC2Q99958 AC012213.3-201ENST00000577199 777 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AL138963.2-201ENST00000605137 226 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC105129.3-201ENST00000605455 485 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC011890.2-201ENST00000613393 294 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC027807.2-201ENST00000616099 408 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC009233.1-201ENST00000616477 371 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC009878.1-201ENST00000621819 340 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 AC091953.2-201ENST00000623979 160 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 Z75746.1-201ENST00000440243 2080 ntBASIC1.87□□□□□ -2.11
FOXC2Q99958 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXC2Q99958 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.86□□□□□ -2.11
FOXC2Q99958 Y_RNA.169-201ENST00000363745 96 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 Y_RNA.796-201ENST00000364268 102 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 Y_RNA.799-201ENST00000364992 102 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 RNU6-1280P-201ENST00000365211 107 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 RNU5E-5P-201ENST00000365379 116 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
FOXC2Q99958 SNORA6-201ENST00000384033 151 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 SNORA80E-201ENST00000384744 137 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC019129.1-201ENST00000403786 261 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 MTCYBP36-201ENST00000404146 440 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 MTND2P18-201ENST00000419962 1030 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 RPS15AP28-201ENST00000435088 386 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC018634.1-201ENST00000437554 401 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 IPO7P1-201ENST00000442031 636 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 TAF9P1-201ENST00000445421 515 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL590365.1-201ENST00000450788 243 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 TAF9P2-201ENST00000454958 515 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.86□□□□□ -2.11
FOXC2Q99958 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AC084851.1-201ENST00000529105 249 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AC012435.1-202ENST00000568772 240 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 MIR4782-201ENST00000577987 79 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC025165.5-201ENST00000602802 578 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.6-201ENST00000603753 252 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.11-201ENST00000604059 253 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC008162.1-201ENST00000604718 254 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.1-201ENST00000604752 252 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.5-201ENST00000605253 252 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.12-201ENST00000605291 253 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.8-201ENST00000605353 252 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL670379.7-201ENST00000605823 252 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AL031775.1-201ENST00000607014 887 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL451064.1-201ENST00000607718 471 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 MIR6845-201ENST00000613182 61 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.86□□□□□ -2.11
FOXC2Q99958 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
FOXC2Q99958 AF246928.1-201ENST00000623768 87 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AC138627.2-201ENST00000624202 601 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 AL603839.4-201ENST00000624658 1005 ntBASIC1.86□□□□□ -2.11
FOXC2Q99958 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
FOXC2Q99958 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
FOXC2Q99958 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.85□□□□□ -2.11
FOXC2Q99958 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
FOXC2Q99958 AC092104.1-201ENST00000497346 1441 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 MIR301A-201ENST00000385261 86 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AL591416.1-201ENST00000404015 867 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AL355497.1-201ENST00000406262 551 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 RNU2-63P-201ENST00000410792 194 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 RNU2-62P-201ENST00000410868 191 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.85□□□□□ -2.11
FOXC2Q99958 ELOCP17-201ENST00000414751 326 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.85□□□□□ -2.11
FOXC2Q99958 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.85□□□□□ -2.11
FOXC2Q99958 AL356583.2-201ENST00000426536 280 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AL445646.1-201ENST00000431784 216 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.85□□□□□ -2.11
FOXC2Q99958 RPS15AP9-201ENST00000439856 381 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.85□□□□□ -2.11
FOXC2Q99958 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.85□□□□□ -2.11
FOXC2Q99958 MTND1P12-201ENST00000455231 147 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 SNORD97-201ENST00000459187 142 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 MTND3P7-201ENST00000474435 343 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 SCARNA16.3-201ENST00000516595 184 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 ACA59.2-201ENST00000517061 156 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 IGLV3-17-201ENST00000519099 244 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AC009902.1-201ENST00000519351 183 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.85□□□□□ -2.11
FOXC2Q99958 MTND4LP18-201ENST00000526864 291 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 AP003181.2-201ENST00000528941 181 ntBASIC1.85□□□□□ -2.11
FOXC2Q99958 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms