Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RNU6-607P-201ENST00000411283 108 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 MTCYBP8-201ENST00000422855 651 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AL669831.1-202ENST00000428504 417 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.6□□□□□ -1.99
CPNE1Q99829 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.6□□□□□ -1.99
CPNE1Q99829 GTF2IP13-201ENST00000438487 386 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 RPS15AP7-201ENST00000439294 405 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 HIGD1AP2-201ENST00000446367 280 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.6□□□□□ -1.99
CPNE1Q99829 Y_RNA.655-201ENST00000515919 96 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 RNU1-86P-201ENST00000516108 154 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 SNORA40.12-201ENST00000516329 111 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 RNU1-107P-201ENST00000516617 154 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.6□□□□□ -1.99
CPNE1Q99829 AP004607.1-201ENST00000524456 203 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 COX6CP5-201ENST00000527162 228 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AC104383.1-201ENST00000530297 370 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AL137161.1-201ENST00000532231 390 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 HIF1AP1-201ENST00000553642 175 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.6□□□□□ -1.99
CPNE1Q99829 AC025678.1-201ENST00000567861 338 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.6□□□□□ -1.99
CPNE1Q99829 AC103810.1-201ENST00000579873 453 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 LRRC37A5P-203ENST00000580181 585 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.6□□□□□ -1.99
CPNE1Q99829 OR1M4P-201ENST00000589199 287 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.6□□□□□ -1.99
CPNE1Q99829 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.6□□□□□ -1.99
CPNE1Q99829 SCARNA4-202ENST00000625402 129 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.6□□□□□ -1.99
CPNE1Q99829 AC010329.5-201ENST00000623497 2174 ntBASIC2.6□□□□□ -1.99
CPNE1Q99829 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CPNE1Q99829 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.59□□□□□ -1.99
CPNE1Q99829 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.59□□□□□ -1.99
CPNE1Q99829 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CPNE1Q99829 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 SNORA25.6-201ENST00000364121 118 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 Y_RNA.381-201ENST00000365666 102 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 RNU6-1127P-201ENST00000384580 107 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 MIR627-201ENST00000384979 97 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AL356057.3-201ENST00000402607 340 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 RAP1BP3-201ENST00000407180 549 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.59□□□□□ -1.99
CPNE1Q99829 RPLP0P7-201ENST00000416050 667 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.59□□□□□ -1.99
CPNE1Q99829 RPL7P54-201ENST00000438336 674 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC016691.1-201ENST00000441321 413 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.59□□□□□ -1.99
CPNE1Q99829 FDX1P2-201ENST00000450769 375 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.59□□□□□ -1.99
CPNE1Q99829 SCARNA18-201ENST00000459004 134 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 RNU6-261P-201ENST00000459506 102 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC083798.1-201ENST00000472671 131 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 MTCO3P9-201ENST00000506989 781 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 SNORA31.6-201ENST00000516241 130 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.59□□□□□ -1.99
CPNE1Q99829 AC106782.4-201ENST00000568264 210 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AP000787.2-201ENST00000604432 568 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.59□□□□□ -1.99
CPNE1Q99829 AC011890.2-201ENST00000613393 294 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC068792.1-201ENST00000621354 417 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
CPNE1Q99829 AC139792.2-201ENST00000624218 587 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 AC004777.1-201ENST00000624317 287 ntBASIC2.59□□□□□ -1.99
CPNE1Q99829 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.59□□□□□ -1.99
CPNE1Q99829 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -1.99
CPNE1Q99829 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.59□□□□□ -2
CPNE1Q99829 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
CPNE1Q99829 MTND5P30-201ENST00000452896 1731 ntBASIC2.59□□□□□ -2
CPNE1Q99829 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.58□□□□□ -2
CPNE1Q99829 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.58□□□□□ -2
CPNE1Q99829 AC073346.2-201ENST00000624724 2058 ntBASIC2.58□□□□□ -2
CPNE1Q99829 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
CPNE1Q99829 Y_RNA.41-201ENST00000362646 102 ntBASIC2.58□□□□□ -2
CPNE1Q99829 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
CPNE1Q99829 SNORD70.1-201ENST00000391007 85 ntBASIC2.58□□□□□ -2
CPNE1Q99829 CIR1P3-201ENST00000405137 479 ntBASIC2.58□□□□□ -2
CPNE1Q99829 RNU2-3P-201ENST00000410144 191 ntBASIC2.58□□□□□ -2
CPNE1Q99829 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
CPNE1Q99829 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.58□□□□□ -2
CPNE1Q99829 MTND3P21-201ENST00000433774 331 ntBASIC2.58□□□□□ -2
CPNE1Q99829 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
CPNE1Q99829 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.58□□□□□ -2
CPNE1Q99829 TPTE2P5-203ENST00000458118 728 ntBASIC2.58□□□□□ -2
CPNE1Q99829 snoU109.2-201ENST00000459316 135 ntBASIC2.58□□□□□ -2
CPNE1Q99829 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
CPNE1Q99829 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
CPNE1Q99829 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.58□□□□□ -2
CPNE1Q99829 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.58□□□□□ -2
CPNE1Q99829 RNU6-720P-201ENST00000516363 108 ntBASIC2.58□□□□□ -2
CPNE1Q99829 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms