Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL031577.2-201ENST00000404133 280 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS2Q99743 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.09□□□□□ -2.07
NPAS2Q99743 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.09□□□□□ -2.07
NPAS2Q99743 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS2Q99743 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.09□□□□□ -2.07
NPAS2Q99743 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.09□□□□□ -2.07
NPAS2Q99743 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS2Q99743 AL353705.4-201ENST00000449661 238 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 RPL7P43-201ENST00000478876 753 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 AC109486.1-201ENST00000486833 374 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 FAM92A1P2-202ENST00000504766 877 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS2Q99743 FAM92A1P1-201ENST00000528023 890 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 AP000873.5-201ENST00000533906 236 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 CYCSP26-201ENST00000534107 320 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
NPAS2Q99743 MIR5697-201ENST00000578045 78 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 MIR4648-201ENST00000580107 72 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 MIR3118-1-201ENST00000581787 76 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 MIR548AB-201ENST00000584917 84 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NPAS2Q99743 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.09□□□□□ -2.07
NPAS2Q99743 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.09□□□□□ -2.07
NPAS2Q99743 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.08□□□□□ -2.08
NPAS2Q99743 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NPAS2Q99743 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS2Q99743 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS2Q99743 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
NPAS2Q99743 MTND2P18-201ENST00000419962 1030 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.08□□□□□ -2.08
NPAS2Q99743 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 RPS6P15-201ENST00000431996 751 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 PGBD4P3-201ENST00000440731 581 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AC096638.1-201ENST00000444678 216 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AL590365.1-201ENST00000450788 243 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS2Q99743 snoU13.15-201ENST00000459407 104 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 MTCO2P6-201ENST00000463134 685 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 RPL9P6-201ENST00000492764 598 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 CKS1BP2-201ENST00000497342 240 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS2Q99743 MTND4P2-201ENST00000507767 1203 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 SNORA25.11-201ENST00000515935 105 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 RNU7-51P-201ENST00000516560 62 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.08□□□□□ -2.08
NPAS2Q99743 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.08□□□□□ -2.08
NPAS2Q99743 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.08□□□□□ -2.08
NPAS2Q99743 AC026464.5-201ENST00000562497 722 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AL355297.2-201ENST00000604792 129 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AC087045.1-201ENST00000605856 382 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AL031775.1-201ENST00000607014 887 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 MIR15A-201ENST00000607334 83 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
NPAS2Q99743 AC009090.3-201ENST00000616553 565 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 AL603755.1-201ENST00000619504 163 ntBASIC2.08□□□□□ -2.08
NPAS2Q99743 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.08□□□□□ -2.08
NPAS2Q99743 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
NPAS2Q99743 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPAS2Q99743 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPAS2Q99743 MIR504-201ENST00000385065 83 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AL079342.1-201ENST00000401460 267 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 CIR1P3-201ENST00000405137 479 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.07□□□□□ -2.08
NPAS2Q99743 CETN4P-201ENST00000432407 469 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.07□□□□□ -2.08
NPAS2Q99743 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 MTND1P30-201ENST00000441241 901 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.07□□□□□ -2.08
NPAS2Q99743 AC090515.1-201ENST00000465295 476 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AP000797.1-201ENST00000478870 387 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC007182.2-201ENST00000489251 402 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 MTND1P22-201ENST00000510572 951 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC106038.2-201ENST00000520706 568 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.07□□□□□ -2.08
NPAS2Q99743 OR5AQ1P-201ENST00000527596 927 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AP003122.4-201ENST00000530980 758 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 SNRPGP18-201ENST00000553000 214 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 PSMA3P-201ENST00000555485 635 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.07□□□□□ -2.08
NPAS2Q99743 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NPAS2Q99743 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 AL022154.1-201ENST00000604698 785 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC096772.1-201ENST00000609146 564 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
NPAS2Q99743 AC008147.4-201ENST00000617570 1204 ntBASIC2.07□□□□□ -2.08
NPAS2Q99743 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.07□□□□□ -2.08
NPAS2Q99743 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPAS2Q99743 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
NPAS2Q99743 AC092809.3-201ENST00000415453 231 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms