Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.33□□□□□ -1.88
TIMP4Q99727 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.33□□□□□ -1.88
TIMP4Q99727 YME1L1P1-201ENST00000429435 297 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 AC087588.1-201ENST00000462203 316 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 RPL17P19-201ENST00000489069 552 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
TIMP4Q99727 AC022447.4-201ENST00000504053 364 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.33□□□□□ -1.88
TIMP4Q99727 ACA59.1-201ENST00000515966 143 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 OR5D17P-201ENST00000531492 978 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 CBX3P8-201ENST00000532412 525 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
TIMP4Q99727 AL157871.3-201ENST00000557231 293 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 SUB1P3-201ENST00000564581 315 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
TIMP4Q99727 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.33□□□□□ -1.88
TIMP4Q99727 AL161798.1-201ENST00000604630 131 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 AL591516.1-201ENST00000611326 274 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 U2.1-201ENST00000618978 145 ntBASIC3.33□□□□□ -1.88
TIMP4Q99727 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.33□□□□□ -1.88
TIMP4Q99727 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.33□□□□□ -1.88
TIMP4Q99727 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TIMP4Q99727 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TIMP4Q99727 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TIMP4Q99727 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
TIMP4Q99727 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.32□□□□□ -1.88
TIMP4Q99727 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 Y_RNA.33-201ENST00000362591 102 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-37P-201ENST00000362692 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-11P-201ENST00000364234 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-7-201ENST00000364784 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-8-201ENST00000365467 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-25P-201ENST00000383873 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-1-201ENST00000383898 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-48P-201ENST00000384161 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-36P-201ENST00000384172 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-4P-201ENST00000384205 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-5P-201ENST00000384238 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-3P-201ENST00000384314 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-16P-201ENST00000384385 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-933P-201ENST00000384424 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-15P-201ENST00000384534 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-2-201ENST00000384627 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-29P-201ENST00000384637 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-9-201ENST00000384776 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-33P-201ENST00000384793 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-1156P-201ENST00000410365 100 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 ATP5A1P2-201ENST00000412323 255 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AC093578.1-201ENST00000415219 368 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 TOMM22P1-201ENST00000418578 312 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.32□□□□□ -1.88
TIMP4Q99727 PGBD4P6-201ENST00000421501 610 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AL158156.1-201ENST00000422509 473 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.32□□□□□ -1.88
TIMP4Q99727 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 HMGN2P31-201ENST00000432430 273 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 OR2AQ1P-201ENST00000451972 200 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.32□□□□□ -1.88
TIMP4Q99727 SNRPGP3-201ENST00000469405 227 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AC010655.3-201ENST00000478818 450 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AC026784.1-201ENST00000507986 352 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 MIR892C-201ENST00000516410 77 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-1231P-201ENST00000517185 103 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AC009812.2-201ENST00000517657 457 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.32□□□□□ -1.88
TIMP4Q99727 AP006245.1-201ENST00000522549 120 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 IGKV2D-19-201ENST00000523346 262 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.32□□□□□ -1.88
TIMP4Q99727 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.32□□□□□ -1.88
TIMP4Q99727 TRAV32-201ENST00000553993 340 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 RNU6-6P-201ENST00000606623 107 ntBASIC3.32□□□□□ -1.88
TIMP4Q99727 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
TIMP4Q99727 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.32□□□□□ -1.88
TIMP4Q99727 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TIMP4Q99727 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.32□□□□□ -1.88
TIMP4Q99727 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
TIMP4Q99727 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.31□□□□□ -1.88
TIMP4Q99727 MFSD8-236ENST00000641509 4050 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TIMP4Q99727 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.31□□□□□ -1.88
TIMP4Q99727 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TIMP4Q99727 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TIMP4Q99727 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 Y_RNA.210-201ENST00000364161 110 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RNA5SP189-201ENST00000364920 115 ntBASIC3.31□□□□□ -1.88
TIMP4Q99727 RNU6-174P-201ENST00000410406 106 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms