| CEP89 | Q96ST8 | MIR301A-201 | ENST00000385261 | 86 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MIR670-201 | ENST00000390142 | 98 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL139039.1-201 | ENST00000401900 | 692 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | ATP5A1P2-201 | ENST00000412323 | 255 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | BX323014.1-201 | ENST00000412876 | 237 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RPL37P10-201 | ENST00000412884 | 288 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC074085.1-201 | ENST00000413598 | 418 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC093578.1-201 | ENST00000415219 | 368 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | LINC01077-201 | ENST00000452288 | 413 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC117465.1-201 | ENST00000457125 | 522 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | Y_RNA.653-201 | ENST00000459091 | 95 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RPL21P8-201 | ENST00000465083 | 535 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC106707.2-201 | ENST00000484182 | 374 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | TRBV12-2-201 | ENST00000489763 | 344 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC139453.3-201 | ENST00000493276 | 369 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC096733.1-201 | ENST00000503844 | 402 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | HMGB3P17-201 | ENST00000504195 | 649 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MGC32805-203 | ENST00000506053 | 652 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RN7SKP24-201 | ENST00000515888 | 284 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RN7SKP219-201 | ENST00000516825 | 296 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-1213P-201 | ENST00000517075 | 94 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-1315P-201 | ENST00000517187 | 99 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC084851.1-201 | ENST00000529105 | 249 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AP005435.4-201 | ENST00000529514 | 284 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL118558.2-201 | ENST00000556294 | 238 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MIR3922-201 | ENST00000585192 | 84 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC012313.1-202 | ENST00000597309 | 423 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC016727.2-201 | ENST00000603988 | 621 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL138686.1-201 | ENST00000612699 | 315 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC137590.2-201 | ENST00000619709 | 240 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC099506.2-201 | ENST00000623074 | 221 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL034408.1-202 | ENST00000636088 | 415 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | TEX30-201 | ENST00000376019 | 1689 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MTND5P30-201 | ENST00000452896 | 1731 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MBNL1-223 | ENST00000498502 | 5258 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | TOPORSLP1-203 | ENST00000493279 | 2871 nt | TSL 4 BASIC | 4.12 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | PHTF2-201 | ENST00000248550 | 4778 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | IL33-201 | ENST00000381434 | 2641 nt | APPRIS P1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | OR9G4-204 | ENST00000641668 | 2608 nt | APPRIS P1 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | GABRG2-213 | ENST00000639046 | 3058 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | CDC27P3-201 | ENST00000635418 | 1910 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | DMD-201 | ENST00000288447 | 3856 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC019117.3-201 | ENST00000637807 | 3523 nt | APPRIS P1 TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU4-66P-201 | ENST00000365199 | 138 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | Y_RNA.512-201 | ENST00000384518 | 102 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | SNORD37.1-201 | ENST00000390968 | 65 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNA5SP424-201 | ENST00000390988 | 115 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC068533.1-201 | ENST00000418542 | 415 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RPS15AP6-201 | ENST00000420703 | 385 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | SKA2P1-201 | ENST00000425592 | 390 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | FABP5P14-201 | ENST00000437273 | 393 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL138921.2-201 | ENST00000443919 | 578 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL358232.1-201 | ENST00000448030 | 501 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL357873.1-201 | ENST00000449215 | 282 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC110794.1-201 | ENST00000505816 | 425 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | LINC02220-201 | ENST00000510065 | 270 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-976P-201 | ENST00000516086 | 111 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC087854.1-201 | ENST00000519706 | 414 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MTCO3P23-201 | ENST00000561363 | 289 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC015813.2-201 | ENST00000578794 | 711 nt | APPRIS P1 TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC022601.1-201 | ENST00000596954 | 577 nt | TSL 4 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | PRR13P7-201 | ENST00000605538 | 430 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | ESRRAP2-204 | ENST00000606337 | 280 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | SNORD39.4-201 | ENST00000620099 | 78 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC007405.1-203 | ENST00000623667 | 932 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC138627.2-201 | ENST00000624202 | 601 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC006355.2-201 | ENST00000629240 | 317 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MIR7153-201 | ENST00000637758 | 57 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC004972.1-201 | ENST00000623934 | 2209 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | NEB-218 | ENST00000603639 | 25578 nt | APPRIS ALT2 TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | NEB-219 | ENST00000604864 | 25578 nt | APPRIS ALT2 TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | CEP170P1-201 | ENST00000502249 | 4587 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MBNL1-206 | ENST00000357472 | 5256 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | PPP1R12A-204 | ENST00000546369 | 2977 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MFSD8-236 | ENST00000641509 | 4050 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | ERBIN-201 | ENST00000284037 | 8647 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | Y_RNA.167-201 | ENST00000363735 | 109 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-884P-201 | ENST00000363889 | 107 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-310P-201 | ENST00000384655 | 107 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | OFD1P1Y-201 | ENST00000411756 | 1225 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC063979.1-201 | ENST00000415539 | 377 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | GPC5-AS1-201 | ENST00000419288 | 393 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | ARL5AP4-201 | ENST00000430731 | 512 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC093083.1-201 | ENST00000438633 | 347 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL354949.1-201 | ENST00000446438 | 170 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL031183.1-201 | ENST00000457667 | 207 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC091976.1-202 | ENST00000509211 | 630 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC104619.4-201 | ENST00000510773 | 249 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-1143P-201 | ENST00000516125 | 104 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | RNU6-1038P-201 | ENST00000516516 | 104 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | HTN3-202 | ENST00000526767 | 578 nt | APPRIS P2 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC027288.1-203 | ENST00000552167 | 567 nt | TSL 4 BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | MIR4425-201 | ENST00000580572 | 84 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC098617.1-215 | ENST00000594798 | 1152 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AL138889.2-201 | ENST00000603883 | 242 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | BRDTP1-201 | ENST00000605735 | 677 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CEP89 | Q96ST8 | AC062037.2-201 | ENST00000610137 | 73 nt | BASIC | 4.1 | □□□□□ -1.75 | | |