Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AL355994.1-201ENST00000424379 260 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC245517.4-201ENST00000448601 281 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 PTP4A1P4-201ENST00000512479 322 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 MTCYBP43-201ENST00000513621 740 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AP003034.1-201ENST00000534621 422 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 RRN3P3-201ENST00000549207 578 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 ZNF92P2-201ENST00000600543 1059 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.01□□□□□ -2.25
LYSMD1Q96S90 U6.99-201ENST00000637524 83 ntBASIC1.01□□□□□ -2.25
LYSMD1Q96S90 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1□□□□□ -2.25
LYSMD1Q96S90 RNU6-1164P-201ENST00000364428 107 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 RNU6-343P-201ENST00000364709 104 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
LYSMD1Q96S90 RNA5SP100-201ENST00000410903 110 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 RNA5SP59-201ENST00000410922 110 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1□□□□□ -2.25
LYSMD1Q96S90 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1□□□□□ -2.25
LYSMD1Q96S90 DEFB130D-201ENST00000426866 237 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1□□□□□ -2.25
LYSMD1Q96S90 SEPT7P5-201ENST00000434048 306 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 USP9YP35-201ENST00000435696 412 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 CR769776.1-201ENST00000441254 787 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1□□□□□ -2.25
LYSMD1Q96S90 SEPT14P24-201ENST00000447236 180 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 RPL7P43-201ENST00000478876 753 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC139453.3-201ENST00000493276 369 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1□□□□□ -2.25
LYSMD1Q96S90 MTCYBP16-201ENST00000509187 1129 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1□□□□□ -2.25
LYSMD1Q96S90 RNA5SP445-201ENST00000515889 115 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 RNU6-1102P-201ENST00000516149 96 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 5S_rRNA.3-201ENST00000517021 110 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 RNU6-902P-201ENST00000517212 91 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1□□□□□ -2.25
LYSMD1Q96S90 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1□□□□□ -2.25
LYSMD1Q96S90 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1□□□□□ -2.25
LYSMD1Q96S90 OR4H6P-202ENST00000603819 340 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC107952.2-201ENST00000606048 486 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 5S_rRNA.19-201ENST00000612131 110 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1□□□□□ -2.25
LYSMD1Q96S90 5S_rRNA.18-201ENST00000621941 110 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AL157770.1-201ENST00000623049 439 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AL133216.2-202ENST00000634512 349 ntBASIC1□□□□□ -2.25
LYSMD1Q96S90 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1□□□□□ -2.25
LYSMD1Q96S90 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
LYSMD1Q96S90 CBX3P1-201ENST00000325243 554 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 SNORA48.1-201ENST00000390879 135 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AL139397.2-201ENST00000404529 772 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC092648.1-201ENST00000425870 423 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 ZFAND6P1-201ENST00000434138 605 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 MTATP6P30-201ENST00000443540 664 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC025465.3-201ENST00000510570 311 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AL353997.4-201ENST00000586196 166 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC097468.3-201ENST00000607956 456 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC096772.1-201ENST00000609146 564 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 AC013470.4-201ENST00000619978 986 ntBASIC0.99□□□□□ -2.25
LYSMD1Q96S90 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.99□□□□□ -2.25
LYSMD1Q96S90 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 OR5T3-201ENST00000303059 1023 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 RNU6-512P-201ENST00000364438 103 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 MIR222-201ENST00000384992 110 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 RNU2-32P-201ENST00000411193 191 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 SRIP3-201ENST00000413200 219 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AL022400.1-201ENST00000423946 935 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC008267.5-201ENST00000424928 265 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 MTND4P6-201ENST00000438297 472 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 MTND2P20-201ENST00000440805 661 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC023194.1-201ENST00000493084 308 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 ARL2BPP4-201ENST00000506854 471 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC093809.1-201ENST00000509155 340 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 RNA5SP102-201ENST00000516865 106 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms