Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL096840.1-201ENST00000603287 93 ntBASIC2.06□□□□□ -2.08
RPRD1AQ96P16 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RPRD1AQ96P16 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RNU6-500P-201ENST00000362349 107 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RNU4-1-201ENST00000363925 141 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RNU6-501P-201ENST00000364072 100 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 MIR1302-8-201ENST00000408342 128 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AL030996.1-201ENST00000411430 235 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AIMP1P2-201ENST00000425294 312 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RPL23AP30-201ENST00000432419 501 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AL121890.1-201ENST00000435457 205 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC010095.1-201ENST00000443543 144 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC003071.1-201ENST00000451219 789 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AL583843.1-201ENST00000456070 346 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 snoU13.26-201ENST00000459452 105 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RNU5B-3P-201ENST00000516601 115 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AP000873.5-201ENST00000533906 236 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC135279.1-201ENST00000543493 504 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 PCMTD1P2-201ENST00000565017 355 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 MIR4529-201ENST00000578110 78 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AL355297.2-201ENST00000604792 129 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AP002360.4-201ENST00000606980 481 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 MIR5739-201ENST00000619803 80 ntBASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.05□□□□□ -2.08
RPRD1AQ96P16 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC009487.4-201ENST00000624969 3585 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 RNU6-395P-201ENST00000365662 106 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AL606517.1-201ENST00000446914 387 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AL590365.1-201ENST00000450788 243 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 UBL5P3-201ENST00000475112 231 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 RNU7-51P-201ENST00000516560 62 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AP003181.2-201ENST00000528941 181 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 MIR5697-201ENST00000578045 78 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AL713866.2-201ENST00000603579 219 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AL022154.1-201ENST00000604698 785 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 RNU6-91P-201ENST00000607774 107 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AL050303.3-201ENST00000613704 284 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC092140.2-201ENST00000618027 521 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 AC024940.5-201ENST00000622889 474 ntBASIC2.04□□□□□ -2.08
RPRD1AQ96P16 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
RPRD1AQ96P16 SNORD3E-201ENST00000362899 217 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 MTCYBP36-201ENST00000404146 440 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC007283.2-201ENST00000424739 197 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC117503.1-201ENST00000472241 394 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC092325.1-201ENST00000566449 554 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AL031775.1-201ENST00000607014 887 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC126118.1-201ENST00000607744 628 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 YWHAEP7-203ENST00000622054 312 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.03□□□□□ -2.08
RPRD1AQ96P16 AC006927.3-201ENST00000638789 384 ntBASIC2.03□□□□□ -2.08
RPRD1AQ96P16 SNORD56.2-201ENST00000363242 71 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 RNU6-39P-201ENST00000384344 107 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 MIR95-201ENST00000385072 81 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC019129.1-201ENST00000403786 261 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 Y_RNA.608-201ENST00000410647 95 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC127391.1-201ENST00000411737 98 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms