Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AC109329.1-201ENST00000518744 317 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AC044913.1-201ENST00000557200 430 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AF038458.1-201ENST00000588406 262 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AL355472.4-201ENST00000610233 626 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AL133445.2-201ENST00000611191 527 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AL132822.1-201ENST00000617063 513 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RNU6-546P-201ENST00000383991 107 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RNU6-1300P-201ENST00000391046 108 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 DHFRP6-201ENST00000401776 268 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 MIR1267-201ENST00000408723 78 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AP000275.1-201ENST00000411943 390 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC115Q96NT0 DYNLT3P2-201ENST00000442517 295 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AC020550.1-201ENST00000447385 163 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RPL39P29-201ENST00000447779 157 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 COX6CP14-201ENST00000469580 174 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RPL7P43-201ENST00000478876 753 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 SNORA31.17-201ENST00000516953 127 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RNU6-714P-201ENST00000516963 103 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 RNU6-1183P-201ENST00000517054 60 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AC079148.1-201ENST00000565944 819 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AC080078.3-201ENST00000605407 463 ntBASIC0.86□□□□□ -2.27
CCDC115Q96NT0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.86□□□□□ -2.27
CCDC115Q96NT0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 SNRPEP3-201ENST00000338402 276 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 Y_RNA.25-201ENST00000362528 102 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RNU6-414P-201ENST00000363705 104 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RNU6-1222P-201ENST00000384615 107 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC139712.2-201ENST00000424302 339 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RPS27P16-201ENST00000425758 201 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 ISCA1P1-201ENST00000426679 387 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 GTF2IP3-201ENST00000433887 494 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 FTH1P25-201ENST00000447665 469 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 DUXAP8-207ENST00000456786 622 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC087477.1-201ENST00000465747 340 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 HMGN1P7-201ENST00000491722 313 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RNVU1-2-201ENST00000516326 135 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RNU7-40P-201ENST00000516397 64 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 RNU6-1261P-201ENST00000517194 104 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC090115.3-201ENST00000553218 849 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 CLIC4P2-201ENST00000601934 717 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AC107952.2-201ENST00000606048 486 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 AL078604.3-201ENST00000615580 211 ntBASIC0.85□□□□□ -2.27
CCDC115Q96NT0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC115Q96NT0 SNORD33-201ENST00000362761 85 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AC244505.5-201ENST00000443639 207 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AC114981.1-201ENST00000503897 678 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AP003392.2-201ENST00000527269 208 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AP001189.2-201ENST00000527320 189 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC115Q96NT0 SNORA77B-201ENST00000578179 125 ntBASIC0.84□□□□□ -2.27
CCDC115Q96NT0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC115Q96NT0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 MIR302D-201ENST00000362275 68 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 SNORD114-19-201ENST00000363072 75 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 RNU1-22P-201ENST00000363334 158 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 SNORD1A-201ENST00000364968 72 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 TAF13P2-201ENST00000416876 286 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC008267.5-201ENST00000424928 265 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 MTCO3P5-201ENST00000433620 714 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC027119.1-201ENST00000440877 241 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AL035666.1-201ENST00000446195 348 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC010409.1-201ENST00000487382 476 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AL133373.1-201ENST00000497098 94 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC022616.8-201ENST00000533569 253 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 LINC00557-201ENST00000563184 1279 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC136619.2-201ENST00000563361 631 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC093249.1-201ENST00000567049 203 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 RN7SL622P-201ENST00000585292 275 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 NIFKP6-201ENST00000598115 845 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AP002906.1-201ENST00000603405 233 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC098614.4-201ENST00000607601 462 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms