Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 U6.42-201ENST00000618440 107 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC010378.1-201ENST00000619270 362 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AP000770.2-201ENST00000623694 100 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 AC092656.1-203ENST00000624134 423 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 MTND5P6-201ENST00000422338 1798 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 HSPA8P4-201ENST00000511877 1920 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.4□□□□□ -2.03
ZNF560Q96MR9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.4□□□□□ -2.03
ZNF560Q96MR9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 U8.2-201ENST00000363156 134 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 RNU4-91P-201ENST00000364778 135 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 RNU6-61P-201ENST00000365528 109 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 FTH1P15-201ENST00000406984 280 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 U3.37-201ENST00000408528 213 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 RNU6-387P-201ENST00000411331 105 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 HMGN1P14-201ENST00000412459 517 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 CYCSP48-201ENST00000417124 323 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC092447.3-201ENST00000426027 686 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AL139415.2-201ENST00000431968 163 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC073614.1-201ENST00000438690 650 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 RPL7P43-201ENST00000478876 753 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC011005.2-201ENST00000487324 359 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC010486.2-201ENST00000505572 483 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC087883.1-201ENST00000551882 391 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AL133241.1-201ENST00000556832 487 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC027807.1-201ENST00000559921 996 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 MIR548AC-201ENST00000585049 88 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC005332.10-201ENST00000612725 619 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AP001506.1-201ENST00000615444 211 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC019226.2-201ENST00000625973 424 ntBASIC2.39□□□□□ -2.03
ZNF560Q96MR9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 RNA5SP125-201ENST00000364843 120 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 CISD1P1-201ENST00000393907 327 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AL031779.1-201ENST00000415663 330 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC016831.2-201ENST00000417179 352 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 MTCYBP5-201ENST00000423752 1135 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC009961.2-201ENST00000435771 251 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 RNA5SP269-201ENST00000459032 137 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC117503.1-201ENST00000472241 394 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC107222.1-201ENST00000510899 637 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC112206.3-201ENST00000514578 389 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 SCARNA24.1-201ENST00000516465 137 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 RNU6-1220P-201ENST00000517126 108 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC090572.1-201ENST00000519251 160 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AP003072.2-201ENST00000527756 676 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 MIR3945-201ENST00000581853 98 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC008521.1-201ENST00000587471 187 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC090578.1-201ENST00000604955 591 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC068276.1-201ENST00000605793 379 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC008250.2-201ENST00000615261 205 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC009831.4-201ENST00000620744 325 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AC138649.3-201ENST00000622154 254 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 AL157786.1-207ENST00000627771 695 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 FARSBP1-201ENST00000435808 1778 ntBASIC2.38□□□□□ -2.03
ZNF560Q96MR9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF560Q96MR9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 RNY4P34-201ENST00000364779 95 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 SNORA40.3-201ENST00000390964 122 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 DPH3P2-201ENST00000422618 250 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AL353706.1-201ENST00000436728 494 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AC096638.1-201ENST00000444678 216 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 RPL7P12-201ENST00000446719 750 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 SNORD42A-201ENST00000459584 64 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 MTAPP1-201ENST00000489154 819 ntBASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.37□□□□□ -2.03
ZNF560Q96MR9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms