Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC005912.1-201ENST00000495392 255 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 MIR892C-201ENST00000516410 77 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AP001328.1-201ENST00000528550 176 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 NACAP3-201ENST00000552100 481 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC024220.1-201ENST00000603675 484 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC108081.1-201ENST00000604358 221 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 SNORD91B-202ENST00000608459 222 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 LINC01355-201ENST00000566551 5444 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM47Q96LD4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM47Q96LD4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM47Q96LD4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM47Q96LD4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 MIR383-201ENST00000362257 73 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 RNU6-294P-201ENST00000364999 102 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC099677.1-201ENST00000420575 175 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 NDUFB4P7-201ENST00000423198 363 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AIMP1P2-201ENST00000425294 312 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 RPS15AP5-201ENST00000436276 388 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC092991.1-201ENST00000477176 376 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 RNU6-191P-201ENST00000516295 94 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 RNU1-45P-201ENST00000517191 141 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 TRAV8-5-201ENST00000537369 341 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC015912.2-201ENST00000571053 181 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC060766.3-201ENST00000591442 263 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AL034351.1-201ENST00000605288 668 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 AP001340.1-201ENST00000624405 217 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 MIR3914-2-201ENST00000637339 95 ntBASIC5.21□□□□□ -1.58
TRIM47Q96LD4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM47Q96LD4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 MIR208A-201ENST00000362287 71 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RNU6-1272P-201ENST00000362776 107 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RNU4-80P-201ENST00000363200 141 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 Y_RNA.230-201ENST00000364348 109 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 Y_RNA.337-201ENST00000365312 102 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RNU6-741P-201ENST00000383889 107 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RNU6-178P-201ENST00000384631 104 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 AL592148.1-201ENST00000413568 445 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 AL117339.3-201ENST00000418733 162 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 AL589765.3-201ENST00000446084 462 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 Y_RNA.651-201ENST00000459380 103 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RNU6-762P-201ENST00000517107 102 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 SRGNP1-201ENST00000603392 451 ntBASIC5.2□□□□□ -1.58
TRIM47Q96LD4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM47Q96LD4 AC092435.4-201ENST00000623012 4159 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 RNU6-961P-201ENST00000363893 105 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 RNU4-9P-201ENST00000364951 139 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 RNU6-578P-201ENST00000390980 103 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 Z74021.1-201ENST00000423610 407 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 SNORA31.3-201ENST00000516029 96 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AC024153.1-201ENST00000603103 365 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 AC112484.5-201ENST00000624189 228 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 U6.95-201ENST00000636931 70 ntBASIC5.19□□□□□ -1.58
TRIM47Q96LD4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TRIM47Q96LD4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms