Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORA31.19-201ENST00000517079 126 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 MIR4790-201ENST00000577799 79 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 NUTF2P8-201ENST00000604593 363 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 APOOP1-201ENST00000604695 592 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC123912.5-201ENST00000605470 343 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 AL442067.2-201ENST00000614033 363 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 U6.105-201ENST00000637379 88 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS50Q96JG6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS50Q96JG6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS50Q96JG6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS50Q96JG6 RNU6-270P-201ENST00000364131 105 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 Y_RNA.394-201ENST00000383942 103 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 SNORD73A-201ENST00000386062 65 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS50Q96JG6 U3.39-201ENST00000408569 239 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 RN7SKP111-201ENST00000410349 271 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 RN7SKP123-201ENST00000410732 291 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 RPL7P10-201ENST00000417407 739 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 PGBD4P6-201ENST00000421501 610 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AL159987.2-201ENST00000432754 307 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 MIR892C-201ENST00000516410 77 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 RNU6-572P-201ENST00000516724 80 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 RNU6-1282P-201ENST00000516735 96 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AP005597.4-201ENST00000526762 229 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC007179.3-201ENST00000604976 235 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC113139.1-201ENST00000605049 239 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 RNU6-85P-201ENST00000605989 107 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 FTX_3.1-201ENST00000610451 147 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC099506.2-201ENST00000623074 221 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC119674.1-207ENST00000641355 633 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS50Q96JG6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS50Q96JG6 AL359693.1-201ENST00000614959 2407 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 MAPK10-322ENST00000641485 4530 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 AC007823.1-201ENST00000569932 1566 ntBASIC3.33□□□□□ -1.88
VPS50Q96JG6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS50Q96JG6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS50Q96JG6 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 SNORD14B-201ENST00000364533 90 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 SNORA40C-201ENST00000391285 128 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 NCOR1P3-201ENST00000420479 303 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 SKA2P1-201ENST00000425592 390 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 AC007560.1-201ENST00000426912 237 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS50Q96JG6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 MTND1P17-201ENST00000448961 204 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 RBMY2UP-201ENST00000453474 324 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 RN7SL807P-201ENST00000470923 297 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 MTCO1P29-201ENST00000496868 288 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 RN7SKP24-201ENST00000515888 284 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 H3F3AP1-201ENST00000559984 334 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 FRG2DP-202ENST00000566967 323 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 AL353621.2-201ENST00000605340 133 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 RMST_4.1-201ENST00000616886 107 ntBASIC3.32□□□□□ -1.88
VPS50Q96JG6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS50Q96JG6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VPS50Q96JG6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS50Q96JG6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS50Q96JG6 MIR412-201ENST00000362142 91 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 RNU6-562P-201ENST00000362731 107 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS50Q96JG6 RNU6-166P-201ENST00000384371 107 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC074085.1-201ENST00000413598 418 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms