Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.12□□□□□ -1.75
SHDQ96IW2 SNORA40.14-201ENST00000516543 86 ntBASIC4.12□□□□□ -1.75
SHDQ96IW2 AC022616.4-201ENST00000522985 181 ntBASIC4.12□□□□□ -1.75
SHDQ96IW2 AL590705.4-201ENST00000532209 134 ntBASIC4.12□□□□□ -1.75
SHDQ96IW2 AC008269.2-201ENST00000561915 1105 ntBASIC4.12□□□□□ -1.75
SHDQ96IW2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.12□□□□□ -1.75
SHDQ96IW2 AC091812.1-201ENST00000432235 1948 ntBASIC4.12□□□□□ -1.75
SHDQ96IW2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHDQ96IW2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.12□□□□□ -1.75
SHDQ96IW2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
SHDQ96IW2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHDQ96IW2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.12□□□□□ -1.75
SHDQ96IW2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHDQ96IW2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.11□□□□□ -1.75
SHDQ96IW2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
SHDQ96IW2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHDQ96IW2 RNU6-858P-201ENST00000362436 107 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 RNU6-942P-201ENST00000363002 107 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 Y_RNA.176-201ENST00000363815 109 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 RNU6-270P-201ENST00000364131 105 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 SNORD14.1-201ENST00000365609 90 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 Y_RNA.380-201ENST00000365663 111 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR195-201ENST00000385194 87 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 DPH3P2-201ENST00000422618 250 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.11□□□□□ -1.75
SHDQ96IW2 HMGN2P10-201ENST00000448085 265 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.11□□□□□ -1.75
SHDQ96IW2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.11□□□□□ -1.75
SHDQ96IW2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.11□□□□□ -1.75
SHDQ96IW2 AL391261.3-201ENST00000557194 520 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR5701-3-201ENST00000578890 82 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AC113195.1-201ENST00000579952 141 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR5701-1-201ENST00000585138 82 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.11□□□□□ -1.75
SHDQ96IW2 AC104695.3-201ENST00000604052 296 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 HSPE1P7-201ENST00000604681 321 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 SNORD58B-201ENST00000607313 66 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.11□□□□□ -1.75
SHDQ96IW2 U3.45-201ENST00000607547 219 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR5701-2-201ENST00000615634 82 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR4272-201ENST00000635924 64 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 MIR3199-2-201ENST00000636243 86 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 AC068254.2-201ENST00000623938 3577 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 MTND5P1-201ENST00000445440 1375 ntBASIC4.11□□□□□ -1.75
SHDQ96IW2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.11□□□□□ -1.75
SHDQ96IW2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHDQ96IW2 AC009541.1-201ENST00000438279 2662 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHDQ96IW2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHDQ96IW2 SNORD50.1-201ENST00000362987 71 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 RNU4-42P-201ENST00000364738 142 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 Y_RNA.557-201ENST00000384680 107 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 MIR628-201ENST00000385229 95 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 SNORD96B-201ENST00000386148 79 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 Y_RNA.645-201ENST00000391229 102 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.1□□□□□ -1.75
SHDQ96IW2 RPS29P4-201ENST00000414733 161 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 BPY2DP-201ENST00000422208 265 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.1□□□□□ -1.75
SHDQ96IW2 HMGN2P31-201ENST00000432430 273 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
SHDQ96IW2 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 snoU13.28-201ENST00000459235 104 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 PPIAP15-201ENST00000479662 484 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 MTCO2P24-201ENST00000515611 426 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AP002404.1-201ENST00000532005 451 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.1□□□□□ -1.75
SHDQ96IW2 CR383656.8-201ENST00000549046 145 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.1□□□□□ -1.75
SHDQ96IW2 VN1R91P-201ENST00000594377 169 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 Z98751.3-201ENST00000604447 521 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AC124312.5-201ENST00000604451 268 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.1□□□□□ -1.75
SHDQ96IW2 AL138880.2-201ENST00000616214 239 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 AL672167.1-203ENST00000641299 2975 ntBASIC4.1□□□□□ -1.75
SHDQ96IW2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHDQ96IW2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHDQ96IW2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHDQ96IW2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.09□□□□□ -1.75
SHDQ96IW2 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 SAR1AP2-201ENST00000392696 594 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 MIR548F4-201ENST00000408515 105 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 MTCO3P19-201ENST00000415864 321 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 EIF1AXP1-201ENST00000419267 435 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 MTCYBP9-201ENST00000431021 303 ntBASIC4.09□□□□□ -1.75
SHDQ96IW2 ABCF2P2-201ENST00000450549 296 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms