Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RPUSD4Q96CM3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC080128.1-201ENST00000474389 1917 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 RNA5SP456-201ENST00000364002 114 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 RNU6-487P-201ENST00000365430 104 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 RNU6-898P-201ENST00000365627 104 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 MIR1-2-201ENST00000384961 85 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 CIR1P3-201ENST00000405137 479 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL596276.1-201ENST00000434465 418 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC004383.1-201ENST00000438135 289 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AP000936.2-201ENST00000447151 681 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL583843.1-201ENST00000456070 346 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC090255.1-201ENST00000495779 349 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 HMGB1P29-201ENST00000505659 499 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC109329.2-201ENST00000519658 482 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 RN7SKP299-201ENST00000606679 301 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC009090.3-201ENST00000616553 565 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL449363.1-201ENST00000617815 186 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 U6.42-201ENST00000618440 107 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL359740.1-201ENST00000624340 592 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL137790.1-201ENST00000634283 177 ntBASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.94□□□□□ -2.1
RPUSD4Q96CM3 AL359854.1-201ENST00000614203 1594 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 SNORD62.1-201ENST00000362541 86 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6-942P-201ENST00000363002 107 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6-384P-201ENST00000364900 104 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6-72P-201ENST00000384285 79 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6-1119P-201ENST00000384349 108 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AL356057.3-201ENST00000402607 340 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 U6atac.2-201ENST00000408644 118 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU4-46P-201ENST00000410818 138 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RPS15AP9-201ENST00000439856 381 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC090515.1-201ENST00000465295 476 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC117503.1-201ENST00000472241 394 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RPL23AP45-201ENST00000476406 468 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC011825.1-201ENST00000484967 388 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC011005.2-201ENST00000487324 359 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 HMGB1P30-201ENST00000492455 606 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC104806.1-201ENST00000508720 308 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC104136.1-201ENST00000512969 394 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC096725.1-201ENST00000514266 313 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC105417.1-201ENST00000514691 285 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RN7SKP298-201ENST00000515950 94 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 RNU6-581P-201ENST00000516214 105 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 SNORA70.24-201ENST00000517233 118 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 BTF3P12-201ENST00000519620 469 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC079600.2-201ENST00000550076 130 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC092325.1-201ENST00000566449 554 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC006362.1-201ENST00000567392 174 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 MIR5692A1-201ENST00000580523 69 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC078795.2-201ENST00000602835 1252 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AL158032.1-201ENST00000605401 106 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC012640.5-201ENST00000623897 319 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC092656.1-203ENST00000624134 423 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 SCARNA4-202ENST00000625402 129 ntBASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.93□□□□□ -2.1
RPUSD4Q96CM3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms