| CLUAP1 | Q96AJ1 | TEX41-209 | ENST00000451478 | 452 nt | TSL 2 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | snoU13.30-201 | ENST00000458951 | 104 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AC010618.1-201 | ENST00000469924 | 477 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | RPS26P15-201 | ENST00000488067 | 348 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | RN7SL283P-201 | ENST00000489055 | 303 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AC098587.1-201 | ENST00000508241 | 540 nt | TSL 4 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | SNORA31.9-201 | ENST00000516429 | 84 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | IGHV3-76-201 | ENST00000522465 | 295 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AC113146.1-202 | ENST00000560259 | 433 nt | TSL 5 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AL451007.1-201 | ENST00000595491 | 289 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AC016747.2-202 | ENST00000607743 | 332 nt | TSL 5 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | Xist_exon1.1-201 | ENST00000618930 | 85 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | MIR8059-201 | ENST00000620427 | 81 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AC091903.1-201 | ENST00000624322 | 454 nt | BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | GLIPR1-201 | ENST00000266659 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | MRPL42-206 | ENST00000549982 | 15582 nt | APPRIS P2 TSL 1 (best) BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | AL033397.1-201 | ENST00000502390 | 3653 nt | TSL 2 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | GCSAML-203 | ENST00000366491 | 4130 nt | APPRIS ALT2 TSL 2 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | UBE2D3-233 | ENST00000618836 | 3472 nt | APPRIS ALT1 TSL 5 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | ZCCHC10-201 | ENST00000324170 | 2178 nt | APPRIS P3 TSL 1 (best) BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | CACNB4-260 | ENST00000637762 | 3800 nt | TSL 5 BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | KMO-204 | ENST00000366559 | 5261 nt | APPRIS P2 TSL 1 (best) BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | ZNF382-203 | ENST00000435416 | 3865 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.22 | □□□□□ -1.57 | | |
| CLUAP1 | Q96AJ1 | GALNT1-201 | ENST00000269195 | 3847 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | DLEU2_6.3-201 | ENST00000340052 | 136 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | SNORD35B-201 | ENST00000363660 | 87 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNA5SP513-201 | ENST00000364648 | 118 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU6-1286P-201 | ENST00000383871 | 107 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU6-611P-201 | ENST00000384276 | 104 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.471-201 | ENST00000384312 | 102 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.489-201 | ENST00000384410 | 101 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU6-1222P-201 | ENST00000384615 | 107 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | DEFB130A-201 | ENST00000400079 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | MIR1302-6-201 | ENST00000408466 | 90 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC011742.1-201 | ENST00000431448 | 434 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC091390.1-201 | ENST00000433904 | 331 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | DEFB130B-201 | ENST00000437818 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RPL21P2-201 | ENST00000440049 | 481 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC243964.1-201 | ENST00000441814 | 261 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC112715.1-201 | ENST00000445534 | 350 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL590664.1-201 | ENST00000448065 | 339 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | HMGN2P10-201 | ENST00000448085 | 265 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RPL29-203 | ENST00000475248 | 551 nt | APPRIS P1 TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RPL31P61-201 | ENST00000496160 | 376 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC008243.1-201 | ENST00000504955 | 389 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU6-408P-201 | ENST00000515910 | 100 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC011524.1-201 | ENST00000590167 | 240 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | B3GNTL1P2-201 | ENST00000603673 | 288 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC019159.1-201 | ENST00000605094 | 187 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC002076.2-201 | ENST00000617362 | 122 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL731566.2-201 | ENST00000618971 | 317 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC137590.2-201 | ENST00000619709 | 240 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | DLEU2_6.2-201 | ENST00000620994 | 136 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | MIR6830-201 | ENST00000636015 | 70 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL773545.4-201 | ENST00000637262 | 310 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL513478.4-201 | ENST00000641636 | 310 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | ESCO1-201 | ENST00000269214 | 4523 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | CDC27-207 | ENST00000531206 | 3177 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | VPS13C-202 | ENST00000261517 | 13400 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | ADGRG2-205 | ENST00000357991 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | CFTR-201 | ENST00000003084 | 6132 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | FAM126B-202 | ENST00000418596 | 9333 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC015813.6-201 | ENST00000624409 | 5808 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | FEZ2-201 | ENST00000305852 | 1782 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | SNORD115-32-201 | ENST00000364079 | 82 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU6-1280P-201 | ENST00000365211 | 107 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | LINC00428-201 | ENST00000415620 | 227 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC074117.2-201 | ENST00000417130 | 397 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC099548.1-201 | ENST00000421443 | 426 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL358453.1-201 | ENST00000422522 | 250 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC017074.1-201 | ENST00000424612 | 561 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | ANXA2P1-201 | ENST00000505539 | 926 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC034223.1-201 | ENST00000511054 | 599 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU4ATAC6P-201 | ENST00000516592 | 126 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | UQCRB-202 | ENST00000517523 | 515 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AP001189.6-201 | ENST00000528781 | 831 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL442163.3-201 | ENST00000554110 | 156 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | LINC01195-201 | ENST00000570118 | 451 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC136624.4-201 | ENST00000573044 | 370 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AC125232.2-201 | ENST00000592457 | 143 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RAC1P9-201 | ENST00000604990 | 392 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RMST_6.1-201 | ENST00000611980 | 203 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | MIR3529-201 | ENST00000637713 | 78 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | TUSC7-203 | ENST00000477539 | 2415 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | AL353743.1-202 | ENST00000431724 | 1695 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | OR56A3-203 | ENST00000641160 | 4438 nt | APPRIS P1 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | TAOK3-202 | ENST00000419821 | 4301 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | COPS2-203 | ENST00000542928 | 1580 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | PUS7L-201 | ENST00000344862 | 13593 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | ZNF345-214 | ENST00000612719 | 2938 nt | APPRIS P1 TSL 4 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | KANSL1L-209 | ENST00000457374 | 2264 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RAPGEF6-201 | ENST00000296859 | 5618 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | MYSM1-203 | ENST00000472487 | 7785 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | LINC02120-201 | ENST00000505518 | 2008 nt | TSL 1 (best) BASIC | 5.19 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | HERC5-203 | ENST00000508159 | 2243 nt | TSL 2 BASIC | 5.19 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | RNU6-770P-201 | ENST00000363929 | 105 nt | BASIC | 5.19 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.214-201 | ENST00000364201 | 112 nt | BASIC | 5.19 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | SNORA70.2-201 | ENST00000364506 | 135 nt | BASIC | 5.19 | □□□□□ -1.58 | | |
| CLUAP1 | Q96AJ1 | BPY2DP-201 | ENST00000422208 | 265 nt | BASIC | 5.19 | □□□□□ -1.58 | | |