Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CYCSP39-201ENST00000565821 309 ntBASIC3.63□□□□□ -1.83
HPS3Q969F9 FGF7P1-201ENST00000582820 288 ntBASIC3.63□□□□□ -1.83
HPS3Q969F9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.63□□□□□ -1.83
HPS3Q969F9 APOOP1-201ENST00000604695 592 ntBASIC3.63□□□□□ -1.83
HPS3Q969F9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.63□□□□□ -1.83
HPS3Q969F9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HPS3Q969F9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HPS3Q969F9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HPS3Q969F9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HPS3Q969F9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HPS3Q969F9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HPS3Q969F9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HPS3Q969F9 RNU2-41P-201ENST00000410991 178 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 Z92545.1-201ENST00000411782 234 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 AC005300.1-201ENST00000428401 373 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.62□□□□□ -1.83
HPS3Q969F9 AC005019.1-201ENST00000436455 431 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS3Q969F9 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.62□□□□□ -1.83
HPS3Q969F9 RPS4XP22-201ENST00000480755 780 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 RPS29P20-201ENST00000489592 171 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 MTCO1P29-201ENST00000496868 288 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 AC103851.1-201ENST00000506833 274 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 RNU1-143P-201ENST00000516296 146 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 RNU6-1332P-201ENST00000516666 104 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HPS3Q969F9 MIR3942-201ENST00000585264 109 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.62□□□□□ -1.83
HPS3Q969F9 U1.23-201ENST00000610293 146 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 AL442067.2-201ENST00000614033 363 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 RNU1-68P-201ENST00000615382 146 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 uc_338.15-201ENST00000615470 191 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 U1.39-201ENST00000621562 146 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 TPTEP1-208ENST00000636884 213 ntBASIC3.62□□□□□ -1.83
HPS3Q969F9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HPS3Q969F9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.62□□□□□ -1.83
HPS3Q969F9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HPS3Q969F9 AC103988.1-201ENST00000566382 2177 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 Y_RNA.301-201ENST00000364990 103 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 RNVU1-14-201ENST00000384770 164 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 RNA5SP252-201ENST00000391131 119 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 NDUFB4P4-201ENST00000404822 243 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AL356432.1-201ENST00000405809 419 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 SNORA11.2-201ENST00000408318 127 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AL096701.2-201ENST00000416920 238 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AL139396.1-201ENST00000421137 167 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.61□□□□□ -1.83
HPS3Q969F9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS3Q969F9 AL714022.1-201ENST00000439897 151 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 MRPL50P4-201ENST00000446432 475 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 RNU7-23P-201ENST00000459465 62 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 RPL7P43-201ENST00000478876 753 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 MTND3P22-201ENST00000510932 243 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AC113155.1-201ENST00000511141 769 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS3Q969F9 AC025423.5-201ENST00000550230 219 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 MIR3672-201ENST00000584290 82 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.61□□□□□ -1.83
HPS3Q969F9 AP000787.2-201ENST00000604432 568 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AC104237.2-201ENST00000612456 443 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 RMST_7.1-201ENST00000621935 268 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 SCARNA4-202ENST00000625402 129 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 AL049781.1-201ENST00000623195 3585 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.61□□□□□ -1.83
HPS3Q969F9 AC110491.1-201ENST00000562191 2010 ntBASIC3.61□□□□□ -1.83
HPS3Q969F9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HPS3Q969F9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
HPS3Q969F9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS3Q969F9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 Y_RNA.212-201ENST00000364177 102 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 Y_RNA.356-201ENST00000365475 113 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 RNU6-1106P-201ENST00000390845 107 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.6□□□□□ -1.83
HPS3Q969F9 BPY2DP-201ENST00000422208 265 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS3Q969F9 SNAP23P1-201ENST00000433229 246 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 CST9LP2-201ENST00000437612 320 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 HMGB1P18-201ENST00000438801 619 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 CYCSP32-201ENST00000440548 321 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 Z75741.1-201ENST00000446793 314 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC006026.2-201ENST00000457376 180 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS3Q969F9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC026371.1-201ENST00000551867 419 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC011611.1-201ENST00000552179 197 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.6□□□□□ -1.83
HPS3Q969F9 HMGN2P15-201ENST00000585707 270 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC023043.2-201ENST00000589678 1026 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC008121.1-201ENST00000603244 268 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms