Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
USP13Q92995 MTCYBP8-201ENST00000422855 651 ntBASIC3.21□□□□□ -1.9
USP13Q92995 PTGES3P4-201ENST00000426243 356 ntBASIC3.21□□□□□ -1.9
USP13Q92995 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.21□□□□□ -1.9
USP13Q92995 RPL7P54-201ENST00000438336 674 ntBASIC3.21□□□□□ -1.9
USP13Q92995 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.21□□□□□ -1.9
USP13Q92995 SNRPEP8-201ENST00000442866 260 ntBASIC3.21□□□□□ -1.9
USP13Q92995 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.21□□□□□ -1.9
USP13Q92995 MTND5P20-201ENST00000448677 143 ntBASIC3.21□□□□□ -1.9
USP13Q92995 NDUFB1P2-201ENST00000449477 176 ntBASIC3.21□□□□□ -1.9
USP13Q92995 FDX1P2-201ENST00000450769 375 ntBASIC3.21□□□□□ -1.9
USP13Q92995 SNRPFP3-201ENST00000457792 225 ntBASIC3.21□□□□□ -1.9
USP13Q92995 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
USP13Q92995 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.21□□□□□ -1.9
USP13Q92995 AC104136.1-201ENST00000512969 394 ntBASIC3.21□□□□□ -1.9
USP13Q92995 RNU6-1281P-201ENST00000516223 105 ntBASIC3.21□□□□□ -1.9
USP13Q92995 SNORA20.3-201ENST00000516880 132 ntBASIC3.21□□□□□ -1.9
USP13Q92995 GLYCAM1-201ENST00000546596 285 ntBASIC3.21□□□□□ -1.9
USP13Q92995 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.21□□□□□ -1.9
USP13Q92995 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.21□□□□□ -1.9
USP13Q92995 AC087045.1-201ENST00000605856 382 ntBASIC3.21□□□□□ -1.9
USP13Q92995 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.21□□□□□ -1.9
USP13Q92995 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
USP13Q92995 CDC27P3-201ENST00000635418 1910 ntBASIC3.21□□□□□ -1.9
USP13Q92995 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
USP13Q92995 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 SNORD14B-201ENST00000364533 90 ntBASIC3.2□□□□□ -1.9
USP13Q92995 RNU6-715P-201ENST00000365204 103 ntBASIC3.2□□□□□ -1.9
USP13Q92995 RNU6-45P-201ENST00000384471 107 ntBASIC3.2□□□□□ -1.9
USP13Q92995 Y_RNA.573-201ENST00000384763 105 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AC236972.1-201ENST00000433225 199 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AL441985.1-201ENST00000457727 251 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC116655.1-201ENST00000508324 901 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC114781.4-201ENST00000513707 639 ntBASIC3.2□□□□□ -1.9
USP13Q92995 RN7SKP219-201ENST00000516825 296 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.2□□□□□ -1.9
USP13Q92995 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.2□□□□□ -1.9
USP13Q92995 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AC005730.3-201ENST00000583067 366 ntBASIC3.2□□□□□ -1.9
USP13Q92995 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 AL391813.1-201ENST00000603098 260 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC091152.3-201ENST00000604227 325 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC007621.1-201ENST00000604544 437 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 MIR7106-201ENST00000612419 65 ntBASIC3.2□□□□□ -1.9
USP13Q92995 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.2□□□□□ -1.9
USP13Q92995 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP13Q92995 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP13Q92995 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP13Q92995 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
USP13Q92995 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
USP13Q92995 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
USP13Q92995 RNU6-552P-201ENST00000362869 119 ntBASIC3.19□□□□□ -1.9
USP13Q92995 RNU6-7-201ENST00000364784 107 ntBASIC3.19□□□□□ -1.9
USP13Q92995 RNU6-8-201ENST00000365467 107 ntBASIC3.19□□□□□ -1.9
USP13Q92995 Y_RNA.481-201ENST00000384373 102 ntBASIC3.19□□□□□ -1.9
USP13Q92995 RNU6-1158P-201ENST00000391167 107 ntBASIC3.19□□□□□ -1.9
USP13Q92995 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP13Q92995 RNU6-908P-201ENST00000410160 94 ntBASIC3.19□□□□□ -1.9
USP13Q92995 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.19□□□□□ -1.9
USP13Q92995 AL606489.2-201ENST00000433886 234 ntBASIC3.19□□□□□ -1.9
USP13Q92995 AL513043.1-201ENST00000439124 535 ntBASIC3.19□□□□□ -1.9
USP13Q92995 Z96811.1-201ENST00000445880 108 ntBASIC3.19□□□□□ -1.9
USP13Q92995 MTND3P10-201ENST00000450967 341 ntBASIC3.19□□□□□ -1.9
USP13Q92995 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.19□□□□□ -1.9
USP13Q92995 RPS26P21-201ENST00000475397 348 ntBASIC3.19□□□□□ -1.9
USP13Q92995 SCARNA17.1-201ENST00000516211 143 ntBASIC3.19□□□□□ -1.9
USP13Q92995 SCARNA17.2-201ENST00000516334 143 ntBASIC3.19□□□□□ -1.9
USP13Q92995 Y_RNA.702-201ENST00000516843 96 ntBASIC3.19□□□□□ -1.9
USP13Q92995 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
USP13Q92995 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.19□□□□□ -1.9
USP13Q92995 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.19□□□□□ -1.9
USP13Q92995 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.19□□□□□ -1.9
USP13Q92995 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.19□□□□□ -1.9
USP13Q92995 AC009994.1-201ENST00000606889 253 ntBASIC3.19□□□□□ -1.9
USP13Q92995 AC025253.1-201ENST00000613623 543 ntBASIC3.19□□□□□ -1.9
USP13Q92995 SCARNA17.4-201ENST00000614296 143 ntBASIC3.19□□□□□ -1.9
USP13Q92995 AL359314.1-201ENST00000616913 261 ntBASIC3.19□□□□□ -1.9
USP13Q92995 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.19□□□□□ -1.9
USP13Q92995 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
USP13Q92995 MIR3662-201ENST00000637030 95 ntBASIC3.19□□□□□ -1.9
USP13Q92995 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
USP13Q92995 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
USP13Q92995 AC000403.1-201ENST00000613696 3585 ntBASIC3.18□□□□□ -1.9
USP13Q92995 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
USP13Q92995 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP13Q92995 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.18□□□□□ -1.9
USP13Q92995 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms