Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RPL23AP3-201ENST00000453844 468 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 SNRPGP9-201ENST00000456025 225 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 HMGB3P17-201ENST00000504195 649 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AC091965.2-201ENST00000512324 613 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AP004247.1-201ENST00000531556 1289 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 MIR3126-201ENST00000577443 74 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AL138963.2-201ENST00000605137 226 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AC012360.2-201ENST00000609349 391 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AC009233.1-201ENST00000616477 371 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 MIR8070-201ENST00000616510 88 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 MIR6134-201ENST00000617606 109 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 CDC27P3-201ENST00000635418 1910 ntBASIC1.46□□□□□ -2.18
LMX1AQ8TE12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LMX1AQ8TE12 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 RNU6-83P-201ENST00000384568 112 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 MIR620-201ENST00000385232 95 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC119751.3-201ENST00000399720 670 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AL356432.1-201ENST00000405809 419 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 MTCO2P21-201ENST00000419780 677 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC104651.1-201ENST00000427559 735 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AL353689.1-201ENST00000438895 199 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 DNAJC19P4-201ENST00000440115 345 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 TAF9P1-201ENST00000445421 515 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 TAF9P2-201ENST00000454958 515 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 RPL39P36-201ENST00000490784 156 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 RNU6-1183P-201ENST00000517054 60 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AL158042.1-201ENST00000605338 460 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC013244.3-201ENST00000605614 388 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AC005014.3-201ENST00000605985 190 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
LMX1AQ8TE12 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 RNA5SP240-201ENST00000365355 128 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 RNU6-906P-201ENST00000384700 70 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 MIR95-201ENST00000385072 81 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 POLHP1-201ENST00000411806 470 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 OR51A5P-201ENST00000415429 942 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 VPS26BP1-201ENST00000417155 755 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 MTND1P32-201ENST00000433043 938 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 TIMM9P1-201ENST00000436122 256 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 OR6C5P-201ENST00000452388 923 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC108059.3-201ENST00000456388 214 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 snoU109.1-201ENST00000459339 135 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC132942.1-201ENST00000486753 483 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 RPL22P13-201ENST00000493291 347 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 UBE2V1P12-201ENST00000503954 474 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 HSPE1P23-201ENST00000509838 286 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 MTATP6P9-201ENST00000515039 680 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC009902.1-201ENST00000519351 183 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AP000907.2-201ENST00000530827 353 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC138627.2-201ENST00000624202 601 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC099654.9-201ENST00000637055 678 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LMX1AQ8TE12 AC006927.4-201ENST00000639187 543 ntBASIC1.44□□□□□ -2.18
LMX1AQ8TE12 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNY4P24-201ENST00000362735 96 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNU1-72P-201ENST00000362976 153 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.43□□□□□ -2.18
LMX1AQ8TE12 Y_RNA.534-201ENST00000384599 112 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNU6-658P-201ENST00000384606 106 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNU6-748P-201ENST00000384648 107 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNU6-19P-201ENST00000384718 107 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 MIR518D-201ENST00000385014 87 ntBASIC1.43□□□□□ -2.18
LMX1AQ8TE12 RNU6-278P-201ENST00000390945 109 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms