Protein–RNA interactions for Protein: Q8NG31

KNL1, Kinetochore scaffold 1, humanhuman

Predictions only

Length 2,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1Q8NG31 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
KNL1Q8NG31 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.25□□□□□ -2.37
KNL1Q8NG31 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
KNL1Q8NG31 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.25□□□□□ -2.37
KNL1Q8NG31 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.25□□□□□ -2.37
KNL1Q8NG31 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.25□□□□□ -2.37
KNL1Q8NG31 AC026271.5-201ENST00000577873 130 ntBASIC0.25□□□□□ -2.37
KNL1Q8NG31 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.25□□□□□ -2.37
KNL1Q8NG31 AC013470.4-201ENST00000619978 986 ntBASIC0.25□□□□□ -2.37
KNL1Q8NG31 AC008443.7-201ENST00000622195 246 ntBASIC0.25□□□□□ -2.37
KNL1Q8NG31 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.25□□□□□ -2.37
KNL1Q8NG31 AL049641.1-201ENST00000441055 1948 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC138393.1-203ENST00000327086 343 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 SNORD51-201ENST00000384320 80 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 RNU6-1035P-201ENST00000384477 107 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 RNU6-272P-201ENST00000411028 104 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 Z82210.1-201ENST00000440037 231 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 HMGB1P36-201ENST00000487709 576 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC145146.1-201ENST00000496370 254 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC006199.1-201ENST00000548728 219 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC100821.1-201ENST00000523153 2479 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 RNU6-72P-201ENST00000384285 79 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 RPL21P24-201ENST00000413752 448 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC097463.2-201ENST00000421074 142 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 RPS20P24-201ENST00000457473 361 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC021739.1-201ENST00000559631 174 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.24□□□□□ -2.37
KNL1Q8NG31 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.24□□□□□ -2.37
KNL1Q8NG31 MIR424-201ENST00000362227 98 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 SNORA25-201ENST00000384384 134 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 MIR325-201ENST00000385260 98 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 AC006461.1-201ENST00000412637 326 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.23□□□□□ -2.37
KNL1Q8NG31 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.23□□□□□ -2.37
KNL1Q8NG31 AC092573.2-201ENST00000434546 243 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.23□□□□□ -2.37
KNL1Q8NG31 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.23□□□□□ -2.37
KNL1Q8NG31 MIR4504-201ENST00000577413 92 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 SNRPGP17-201ENST00000603780 214 ntBASIC0.23□□□□□ -2.37
KNL1Q8NG31 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.23□□□□□ -2.37
KNL1Q8NG31 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.23□□□□□ -2.37
KNL1Q8NG31 RNU6-989P-201ENST00000362756 107 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 RNU6-43P-201ENST00000384302 107 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.22□□□□□ -2.37
KNL1Q8NG31 DEFB108D-201ENST00000527787 222 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC021171.1-201ENST00000603137 706 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC025588.3-201ENST00000604182 274 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC018618.2-201ENST00000604770 446 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AL365204.3-201ENST00000612448 685 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC007792.1-201ENST00000623023 402 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC092125.1-201ENST00000562568 1995 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 SNORD33-201ENST00000362761 85 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 RNU2-7P-201ENST00000410794 178 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 BEND7P1-201ENST00000422058 457 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 RPL37P21-201ENST00000435890 276 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC108729.1-201ENST00000487812 947 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.22□□□□□ -2.37
KNL1Q8NG31 CYP3A52P-201ENST00000563326 91 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.22□□□□□ -2.37
KNL1Q8NG31 MIR3937-201ENST00000580135 106 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AL669831.4-202ENST00000590817 238 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 MTCYBP22-201ENST00000603788 447 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 AC080013.4-201ENST00000607624 649 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 MIR5739-201ENST00000619803 80 ntBASIC0.22□□□□□ -2.37
KNL1Q8NG31 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
KNL1Q8NG31 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
KNL1Q8NG31 SNORD18A-201ENST00000363753 72 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 RNU4-67P-201ENST00000364569 141 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 MT-TC-201ENST00000387405 66 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC078974.1-201ENST00000411597 223 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC244023.1-201ENST00000426884 112 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.21□□□□□ -2.38
KNL1Q8NG31 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.21□□□□□ -2.38
KNL1Q8NG31 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC005741.1-201ENST00000511094 432 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC007834.2-201ENST00000536310 343 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 RAB11AP2-201ENST00000545905 639 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AL713866.2-201ENST00000603579 219 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC242498.1-201ENST00000604134 111 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AL139344.1-201ENST00000605228 195 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.21□□□□□ -2.38
KNL1Q8NG31 AL138726.1-201ENST00000614873 333 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 AC243994.1-201ENST00000618627 109 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
KNL1Q8NG31 SNORD1A-201ENST00000364968 72 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 SNORA4.3-201ENST00000365564 137 ntBASIC0.21□□□□□ -2.38
KNL1Q8NG31 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
KNL1Q8NG31 MIR561-201ENST00000385216 97 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms