Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 Y_RNA.25-201ENST00000362528 102 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR217-201ENST00000384817 110 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR325-201ENST00000385260 98 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC104073.1-201ENST00000451988 151 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC108729.2-201ENST00000476543 840 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MTND5P13-201ENST00000513046 1079 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AP005435.4-201ENST00000529514 284 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC013244.3-201ENST00000605614 388 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-216P-201ENST00000363282 104 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 SNORA16B-201ENST00000364674 135 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-1222P-201ENST00000384615 107 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 BTF3P8-201ENST00000414577 526 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 EIF4EP4-201ENST00000424916 578 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 GPM6BP2-201ENST00000432046 144 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RPL26P6-201ENST00000440913 438 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RAB11AP1-201ENST00000442978 646 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 GPM6BP1-201ENST00000446387 144 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-714P-201ENST00000516963 103 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 DEFB108E-201ENST00000524692 240 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AP005639.2-201ENST00000527592 928 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 HMGN2P15-201ENST00000585707 270 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR6835-201ENST00000621552 64 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AP002791.1-201ENST00000623291 381 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL118508.4-201ENST00000624142 1176 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC107982.1-201ENST00000507171 1300 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 Z75746.1-201ENST00000440243 2080 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR26B-201ENST00000362251 77 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-716P-201ENST00000365621 103 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR329-1-201ENST00000385028 80 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC078974.1-201ENST00000411597 223 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC060773.1-201ENST00000421698 310 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC008379.1-201ENST00000463655 464 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC104806.1-201ENST00000508720 308 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR3198-2-201ENST00000577868 80 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC126365.2-201ENST00000580630 379 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AP001269.3-201ENST00000588718 329 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 BNIP3P26-201ENST00000600827 554 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-91P-201ENST00000607774 107 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL109620.1-201ENST00000618738 1197 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU1-23P-201ENST00000363361 144 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-1066P-201ENST00000363573 105 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.167-201ENST00000363735 109 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RN7SKP158-201ENST00000410453 326 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU2-47P-201ENST00000410649 186 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RPL17P35-201ENST00000432217 549 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RPS20P20-201ENST00000460498 340 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC121161.1-201ENST00000510606 652 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNA5SP290-201ENST00000517133 127 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AP003066.2-201ENST00000529375 555 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC008269.2-201ENST00000561915 1105 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC012435.1-202ENST00000568772 240 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR4299-201ENST00000577899 72 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MTATP6P3-201ENST00000581686 676 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR8084-201ENST00000614105 89 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 SNORD115-3-201ENST00000363100 82 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 SNORA25B-201ENST00000365507 128 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-354P-201ENST00000383862 107 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 SNORA2A-201ENST00000383885 135 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RNU6-610P-201ENST00000384264 107 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MTND2P5-201ENST00000432656 1006 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL353706.1-201ENST00000436728 494 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL592447.1-201ENST00000447592 540 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 RPL26P9-201ENST00000457466 433 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 CYP2C59P-201ENST00000457790 269 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC023790.1-201ENST00000482174 347 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 SNORA4.4-201ENST00000515921 135 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 SCARNA1-201ENST00000517138 166 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC097460.3-201ENST00000623099 442 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 MIR936-201ENST00000401264 98 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC139453.3-201ENST00000493276 369 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.31□□□□□ -2.36
SYNE1Q8NF91 OR1M4P-201ENST00000589199 287 ntBASIC0.31□□□□□ -2.36
SYNE1Q8NF91 AC025588.2-201ENST00000604851 466 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms