Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 MTND5P17-201ENST00000418405 1603 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 Y_RNA.33-201ENST00000362591 102 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-1287P-201ENST00000362914 107 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-1280P-201ENST00000365211 107 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 SNORD115-7-201ENST00000365306 82 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-259P-201ENST00000383999 107 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-116P-201ENST00000384042 109 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 SNORA75B-201ENST00000384053 137 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 Y_RNA.517-201ENST00000384551 106 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-1060P-201ENST00000384664 107 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-19P-201ENST00000384718 107 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 MIR147B-201ENST00000390185 80 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 UBE2V1P2-201ENST00000397758 440 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 UBA52P6-201ENST00000399822 382 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC010975.2-201ENST00000427781 588 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL591704.1-201ENST00000432574 275 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC002486.1-201ENST00000435098 391 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC004383.1-201ENST00000438135 289 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 BRK1P2-201ENST00000442875 223 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL162395.1-201ENST00000457882 422 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC022364.2-201ENST00000457963 554 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 RNU7-182P-201ENST00000459009 62 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AP001324.2-201ENST00000461163 319 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC096725.1-201ENST00000514266 313 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC243972.3-201ENST00000539655 198 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC022080.3-201ENST00000544433 482 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 MIR1273C-201ENST00000578669 77 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL022154.1-201ENST00000604698 785 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL160281.1-201ENST00000605307 311 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 SNORD14A-201ENST00000606526 91 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AL359740.1-201ENST00000624340 592 ntBASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC71LQ8N9Z2 MTND5P26-201ENST00000426018 1752 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 Y_RNA.159-201ENST00000363674 87 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 MIR454-201ENST00000390180 115 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC068050.1-201ENST00000394891 380 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 RPL17P50-201ENST00000396131 546 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AL356057.3-201ENST00000402607 340 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AL592148.1-201ENST00000413568 445 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 MTCO3P41-201ENST00000414801 328 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 MTATP6P18-201ENST00000417994 673 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AL583843.1-201ENST00000456070 346 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC011005.2-201ENST00000487324 359 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC108078.1-201ENST00000508073 725 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC116655.1-201ENST00000508324 901 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC023141.11-201ENST00000508864 202 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC091133.4-201ENST00000511142 308 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 RNA5SP503-201ENST00000517047 117 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 LINC00933-203ENST00000559812 219 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 MIR4775-201ENST00000581168 75 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC008121.1-201ENST00000603244 268 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AL136363.2-201ENST00000604173 851 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC064807.4-201ENST00000607201 407 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC011155.2-201ENST00000623202 216 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 SEPT14P19-203ENST00000633205 211 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 OR5AK4P-201ENST00000635912 903 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC71LQ8N9Z2 AC007336.1-201ENST00000576365 3828 ntBASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 Y_RNA.1-201ENST00000352915 104 ntBASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 SNORD3E-201ENST00000362899 217 ntBASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-623P-201ENST00000363143 105 ntBASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 RNU4-48P-201ENST00000365559 182 ntBASIC2.04□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-395P-201ENST00000365662 106 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms