Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL591034.2-201ENST00000402839 359 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 SNORD56-201ENST00000413522 71 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC138623.1-201ENST00000418060 216 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL591212.2-201ENST00000433923 257 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL137159.1-201ENST00000452808 512 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 snoU13.23-201ENST00000458863 104 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 RPL7P43-201ENST00000478876 753 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC018868.1-201ENST00000491307 315 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 RNU6-548P-201ENST00000517083 115 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 RNU6-1315P-201ENST00000517187 99 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 RPL30P11-203ENST00000598995 310 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC073410.2-201ENST00000603240 332 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 SNRPGP17-201ENST00000603780 214 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 NDUFA8P1-201ENST00000605525 367 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AC018638.7-201ENST00000605836 1114 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 AL365204.3-201ENST00000612448 685 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 ZNF876P-202ENST00000398732 1485 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 RNU1-23P-201ENST00000363361 144 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 RNU1-57P-201ENST00000384491 166 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 Y_RNA.534-201ENST00000384599 112 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 FTH1P15-201ENST00000406984 280 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 FCF1P10-201ENST00000407590 479 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 RNU6-1025P-201ENST00000410629 104 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 PGBD4P6-201ENST00000421501 610 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 RPS3AP22-201ENST00000488297 769 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 RNU6-586P-201ENST00000517265 104 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AL157871.3-201ENST00000557231 293 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AC015712.3-201ENST00000559380 164 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AC136619.2-201ENST00000563361 631 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AL356432.3-201ENST00000568952 465 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AP001981.2-201ENST00000603241 418 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 ELOCP5-201ENST00000604924 333 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AC068944.2-201ENST00000610373 403 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AL773524.1-201ENST00000614065 229 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
ZIC4Q8N9L1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 RNU6-858P-201ENST00000362436 107 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 Y_RNA.33-201ENST00000362591 102 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 RN7SKP101-201ENST00000411376 320 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 PIGPP2-201ENST00000411569 458 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC009518.2-201ENST00000418056 731 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC244636.1-201ENST00000421152 228 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 BX510359.4-201ENST00000423750 193 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 MTCO2P20-201ENST00000437339 673 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AL031313.1-201ENST00000448435 256 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 BZW1P2-201ENST00000473537 826 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 RNU6-914P-201ENST00000516749 109 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 MIR1273C-201ENST00000578669 77 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC174048.1-201ENST00000603389 144 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AL158042.1-201ENST00000605338 460 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC021646.1-201ENST00000605469 484 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC022893.3-201ENST00000607665 437 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 AC092656.1-203ENST00000624134 423 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 MIR3529-201ENST00000637713 78 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 MTND4P23-201ENST00000447723 1363 ntBASIC1.42□□□□□ -2.18
ZIC4Q8N9L1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC092104.1-201ENST00000497346 1441 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNU1-17P-201ENST00000363022 152 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNY3P13-201ENST00000365542 102 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNU6-395P-201ENST00000365662 106 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNU6-1032P-201ENST00000384100 107 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNU6-166P-201ENST00000384371 107 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 RNA5SP213-201ENST00000391031 106 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC006366.1-201ENST00000422002 759 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.41□□□□□ -2.18
ZIC4Q8N9L1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms