Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC097463.2-201ENST00000421074 142 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS8Q8N3P4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS8Q8N3P4 DUXAP8-207ENST00000456786 622 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC114982.1-201ENST00000469402 321 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC079140.2-201ENST00000506193 142 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS8Q8N3P4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS8Q8N3P4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC073544.2-201ENST00000601155 540 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 BBIP1P1-201ENST00000602999 279 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC021171.1-201ENST00000603137 706 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS8Q8N3P4 AC068787.1-201ENST00000623908 691 ntBASIC0.61□□□□□ -2.31
VPS8Q8N3P4 SNORD33-201ENST00000362761 85 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 RNU6-741P-201ENST00000383889 107 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 MIR1267-201ENST00000408723 78 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 NCOR1P3-201ENST00000420479 303 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC092685.1-201ENST00000447960 1243 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC018868.1-201ENST00000491307 315 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC145146.1-201ENST00000496370 254 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 SNORD19.2-201ENST00000516978 73 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC005261.5-201ENST00000596280 355 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 BNIP3P23-201ENST00000599655 511 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 SUMO2P14-201ENST00000604488 293 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 ELOCP5-201ENST00000604924 333 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC084824.5-201ENST00000612009 413 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 MIR2909-201ENST00000617113 69 ntBASIC0.6□□□□□ -2.31
VPS8Q8N3P4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS8Q8N3P4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VPS8Q8N3P4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
VPS8Q8N3P4 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 RNU6-414P-201ENST00000363705 104 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 RNU1-124P-201ENST00000363861 145 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 MIR10B-201ENST00000385011 110 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 AC078974.1-201ENST00000411597 223 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 RPS27P16-201ENST00000425758 201 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 AL358176.2-201ENST00000425769 204 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 HMGN1P33-201ENST00000432945 451 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 MTCO1P44-201ENST00000441935 243 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 HMGN2P9-201ENST00000476875 229 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 AK3P2-201ENST00000507976 429 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
VPS8Q8N3P4 AC012414.6-201ENST00000568241 401 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 MIR3167-201ENST00000579623 85 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
VPS8Q8N3P4 MTND4P16-201ENST00000466108 1367 ntBASIC0.59□□□□□ -2.32
VPS8Q8N3P4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS8Q8N3P4 RNU6-921P-201ENST00000384361 107 ntBASIC0.58□□□□□ -2.32
VPS8Q8N3P4 AL035666.1-201ENST00000446195 348 ntBASIC0.58□□□□□ -2.32
VPS8Q8N3P4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS8Q8N3P4 PRELID3BP1-201ENST00000457142 540 ntBASIC0.58□□□□□ -2.32
VPS8Q8N3P4 RAP1BP2-201ENST00000478270 544 ntBASIC0.58□□□□□ -2.32
VPS8Q8N3P4 AC134050.1-201ENST00000495088 933 ntBASIC0.58□□□□□ -2.32
VPS8Q8N3P4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VPS8Q8N3P4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.58□□□□□ -2.32
VPS8Q8N3P4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.58□□□□□ -2.32
VPS8Q8N3P4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 MIR597-201ENST00000384968 97 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 RNU2-15P-201ENST00000410692 191 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 RPP40P1-201ENST00000426762 456 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AC015724.1-201ENST00000478577 156 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 RPL36AP48-201ENST00000485521 314 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AC022483.1-201ENST00000514020 567 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 MIR3937-201ENST00000580135 106 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AC069304.2-201ENST00000605154 435 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AC117490.2-201ENST00000610042 594 ntBASIC0.57□□□□□ -2.32
VPS8Q8N3P4 AL117342.1-201ENST00000404861 406 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 FTH1P15-201ENST00000406984 280 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 AC007919.1-201ENST00000429380 217 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
VPS8Q8N3P4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS8Q8N3P4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS8Q8N3P4 SNORA25.11-201ENST00000515935 105 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 DUXAP11-201ENST00000603858 526 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 AC112220.3-201ENST00000605502 502 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS8Q8N3P4 AP003400.6-201ENST00000624698 740 ntBASIC0.56□□□□□ -2.32
VPS8Q8N3P4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
VPS8Q8N3P4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 MIR1302-8-201ENST00000408342 128 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 RNA5SP100-201ENST00000410903 110 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 RNA5SP59-201ENST00000410922 110 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms