Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.86-201ENST00000363020 111 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 U3.12-201ENST00000364498 214 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 SNORD14B-201ENST00000364533 90 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.390-201ENST00000383932 102 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 MIR34A-201ENST00000385130 110 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AL162578.1-201ENST00000406202 378 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AL592148.1-201ENST00000413568 445 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 CYCSP33-201ENST00000414485 327 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 RPLP0P7-201ENST00000416050 667 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 MTND4LP11-201ENST00000422184 280 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AL590639.1-201ENST00000456484 337 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AP000852.1-201ENST00000472460 573 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 RPS29P20-201ENST00000489592 171 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 RNU1-86P-201ENST00000516108 154 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 RNU1-143P-201ENST00000516296 146 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 RNU1-107P-201ENST00000516617 154 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 CYCSP27-201ENST00000527643 293 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 CYCSP39-201ENST00000565821 309 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 MIR4506-201ENST00000584693 77 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC093732.2-201ENST00000607950 274 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 U1.23-201ENST00000610293 146 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 RNU1-68P-201ENST00000615382 146 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 U1.39-201ENST00000621562 146 ntBASIC2.84□□□□□ -1.95
BEST3Q8N1M1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.84□□□□□ -1.95
BEST3Q8N1M1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
BEST3Q8N1M1 AC093010.3-201ENST00000570269 15214 ntBASIC2.84□□□□□ -1.96
BEST3Q8N1M1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.96
BEST3Q8N1M1 AC110491.1-201ENST00000562191 2010 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 MIR22-201ENST00000362190 85 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 Y_RNA.72-201ENST00000362894 103 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 RN7SKP220-201ENST00000410611 288 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 RN7SKP58-201ENST00000411010 305 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC138393.2-201ENST00000414742 246 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 BPY2DP-201ENST00000422208 265 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC022018.1-201ENST00000430685 241 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC098831.1-201ENST00000440661 216 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 MTND3P10-201ENST00000450967 341 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 RN7SL75P-201ENST00000461926 281 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC025465.4-201ENST00000513422 638 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 SNORA14.1-201ENST00000516113 141 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 SNORA31.21-201ENST00000517180 77 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 RPL7P20-201ENST00000520308 745 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC023050.3-201ENST00000541142 333 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 PSMA3P-201ENST00000555485 635 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 HMGN2P15-201ENST00000585707 270 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC087045.1-201ENST00000605856 382 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC090617.10-201ENST00000624308 134 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
BEST3Q8N1M1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.83□□□□□ -1.96
BEST3Q8N1M1 AC000403.1-201ENST00000613696 3585 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 MAPK10-362ENST00000641864 4484 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 MTND5P19-201ENST00000424872 1794 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 GABRG2-229ENST00000641017 3628 ntBASIC2.82□□□□□ -1.96
BEST3Q8N1M1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BEST3Q8N1M1 Y_RNA.160-201ENST00000363677 92 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms